Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004446.1 Kokia drynarioides strain JFW-HI SEQ_117847, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60887

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
433--489
27
2.2
26
80
3
60
21
26
21
31
1.98
139--1071
464
2.0
464
98
0
1812
31
24
12
30
1.92
1477--1534
22
2.7
22
94
2
100
44
0
10
44
1.38
3504--3529
13
2.0
13
100
0
52
38
15
23
23
1.92
8594--8647
21
2.6
21
88
5
74
27
7
22
42
1.80
11225--11277
3
17.7
3
100
0
106
67
0
0
32
0.91
12397--12473
23
3.3
23
81
3
93
16
20
23
38
1.92
14680--14740
27
2.3
27
88
2
88
21
24
14
39
1.91
17772--17814
20
2.2
20
87
4
61
53
2
2
41
1.26
18696--18737
16
2.6
16
96
0
75
38
4
11
45
1.62
21535--21738
95
2.1
94
82
7
225
39
9
12
37
1.77
21818--21859
22
1.9
22
90
0
66
42
0
4
52
1.22
22337--22401
30
2.2
30
91
0
103
58
13
4
23
1.54
25046--25071
7
3.7
7
100
0
52
84
0
0
15
0.62
25034--25080
16
3.1
16
76
17
55
72
0
0
27
0.85
25142--25192
24
2.2
23
82
10
59
64
5
1
27
1.27
29191--29323
59
2.3
59
83
7
180
30
31
16
21
1.95
42375--42443
25
2.7
26
79
4
77
36
14
4
44
1.65
42375--42443
13
5.3
13
70
6
50
36
14
4
44
1.65
42375--42444
26
2.7
27
75
6
72
35
14
4
45
1.64
43305--43335
16
1.9
16
100
0
62
48
0
32
19
1.49
49281--49329
24
2.0
24
84
7
64
51
8
22
18
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48664--49576
455
2.0
455
97
0
1709
41
13
15
29
1.85
51416--51524
26
4.2
26
76
6
96
30
23
17
28
1.97
51538--51598
18
3.3
18
86
2
68
32
24
21
21
1.98
51557--51606
18
2.7
18
87
3
64
32
24
24
20
1.98
57014--57038
3
8.3
3
100
0
50
68
0
32
0
0.90

Tables:   1

The End!