Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004449.1 Kokia drynarioides strain JFW-HI SEQ_117851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81391

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5766--5800
16
2.2
16
100
0
70
51
14
5
28
1.65
12086--12328
76
3.2
76
84
6
280
39
8
8
43
1.65
12601--12632
12
2.7
12
100
0
64
18
59
0
21
1.38
12622--12673
24
2.2
24
82
0
59
11
34
5
48
1.63
12583--12666
18
4.7
18
72
0
60
15
41
2
40
1.60
16916--16944
9
3.3
9
90
9
51
44
0
0
55
0.99
16918--16952
17
2.1
17
88
0
52
48
0
2
48
1.16
16995--17050
24
2.4
23
76
5
58
55
0
21
23
1.44
31565--31633
24
2.8
24
86
2
102
53
10
11
24
1.68
33582--33638
30
1.9
30
88
0
87
66
3
1
28
1.18
34501--34695
94
2.1
94
84
0
255
47
10
11
30
1.73
44118--44174
21
2.8
21
79
10
64
28
1
3
66
1.18
44123--44166
22
2.0
23
86
4
63
29
0
2
68
1.02
44129--44200
32
2.2
33
76
11
78
29
2
1
66
1.14
44761--44801
1
41.0
1
85
0
55
92
0
7
0
0.38
44762--44807
22
2.2
20
88
7
65
89
0
10
0
0.50
44762--44807
14
3.3
14
87
0
65
89
0
10
0
0.50
46976--47041
24
2.8
25
82
13
77
40
1
0
57
1.08
47012--47053
7
5.9
7
88
5
66
45
0
0
54
0.99
55393--55418
12
2.2
12
100
0
52
15
23
7
53
1.67
60103--61072
483
2.0
483
91
1
1561
24
23
15
36
1.93
61256--64694
888
3.9
861
82
7
3717
26
23
14
34
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62574--64705
885
2.4
884
85
3
2820
26
23
15
35
1.94
68752--68786
15
2.2
16
90
5
54
34
0
0
65
0.93
71849--71899
22
2.3
22
82
0
57
9
9
17
62
1.52
74173--74228
23
2.4
23
82
8
60
46
3
5
44
1.43

Tables:   1

The End!