Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004474.1 Kokia drynarioides strain JFW-HI SEQ_117894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56376

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
683--900
110
2.0
110
92
1
366
44
10
9
36
1.71
4360--4406
25
1.9
24
95
4
85
59
2
0
38
1.09
8619--8672
23
2.3
23
87
3
72
24
5
7
62
1.42
9770--9833
10
6.5
10
69
16
53
64
6
0
29
1.18
9768--9833
9
7.0
9
79
14
71
63
6
0
30
1.18
9772--9833
19
3.2
19
84
6
81
64
6
0
29
1.18
10598--10647
24
2.1
23
85
3
64
50
0
0
50
1.00
16491--16527
19
1.9
19
88
0
56
40
13
5
40
1.67
17259--17318
30
2.1
28
84
6
75
55
0
25
20
1.44
16982--17324
169
2.0
176
84
7
463
41
0
33
24
1.55
20883--20947
21
3.3
19
79
16
53
33
1
1
63
1.13
20892--20948
20
2.8
20
86
5
80
33
1
0
64
1.04
21276--21528
84
3.0
84
96
1
463
34
13
8
43
1.75
22843--22881
18
2.2
18
90
0
60
20
15
15
48
1.81
24907--25141
29
8.1
29
80
11
227
36
24
1
37
1.64
24926--25141
57
3.7
58
83
11
264
37
23
0
37
1.61
25097--25264
29
5.8
29
74
10
121
32
27
7
33
1.84
25096--25232
58
2.4
59
79
10
149
33
27
6
32
1.82
31566--31594
5
5.8
5
100
0
58
62
0
0
37
0.96
31930--31987
22
2.6
22
100
0
116
55
0
0
44
0.99
31982--32094
28
3.6
29
73
25
97
38
4
7
49
1.52
31968--32091
34
3.6
34
74
23
125
40
4
7
48
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40223--40283
11
5.7
11
75
14
56
24
32
0
42
1.55
44798--44937
69
2.0
69
97
0
262
14
23
18
43
1.87
54387--54439
26
2.0
27
85
3
72
47
11
18
22
1.81

Tables:   1

The End!