Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004479.1 Kokia drynarioides strain JFW-HI SEQ_117901, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71639

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3116--3153
6
6.5
6
87
6
60
15
0
0
84
0.63
3115--3153
17
2.3
18
86
13
64
17
0
0
82
0.68
3918--4122
105
2.0
105
89
1
313
32
12
25
29
1.92
4119--4147
11
2.5
12
94
5
51
86
0
13
0
0.58
4119--4147
6
5.0
6
91
8
51
86
0
13
0
0.58
9258--9309
17
3.1
17
75
10
61
75
1
1
21
1.00
9240--9367
34
3.6
35
78
12
134
62
3
6
27
1.37
9241--9367
37
3.6
37
81
8
156
62
3
6
26
1.36
9889--9937
21
2.2
22
82
13
57
16
8
24
51
1.71
12942--13011
19
3.6
19
77
11
70
42
12
22
21
1.87
13012--13070
20
3.0
20
84
0
82
23
16
35
23
1.95
16905--16952
21
2.4
19
86
6
60
41
16
20
20
1.90
28301--28343
21
2.0
21
82
8
52
55
0
39
4
1.20
28764--28801
18
2.1
18
85
9
51
15
13
10
60
1.59
39540--39567
12
2.3
12
100
0
56
32
10
25
32
1.90
41608--41664
9
6.4
9
74
11
55
68
1
1
28
1.09
41626--41677
17
3.1
17
80
0
68
75
1
1
21
1.00
41609--41735
37
3.6
36
84
6
161
64
3
4
26
1.31
41852--42005
76
2.0
76
96
0
281
39
13
20
25
1.90
42293--42340
21
2.2
22
82
14
55
16
8
20
54
1.68
45407--45454
13
3.8
13
75
5
53
50
14
16
18
1.79
45479--45522
20
2.2
20
91
0
70
20
11
38
29
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48685--48722
18
2.1
18
85
9
51
13
13
13
60
1.59
50293--50391
45
2.2
45
96
3
182
34
31
17
17
1.93
54230--54437
103
2.0
103
99
0
407
35
15
26
22
1.94
57133--57710
37
15.7
37
84
0
719
14
21
31
33
1.92
57196--57332
21
7.2
20
65
28
77
11
22
35
30
1.90
57209--57304
16
5.4
16
67
26
59
12
25
35
27
1.92
57336--57399
21
3.3
20
68
28
57
9
23
32
34
1.87
57521--57589
21
3.6
21
65
25
62
10
23
34
31
1.88
61323--61363
11
3.4
12
90
10
66
90
0
9
0
0.46
69581--69619
16
2.5
16
91
4
62
48
0
10
41
1.37
70002--70036
17
2.0
18
88
5
54
25
5
2
65
1.28

Tables:   1

The End!