Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004489.1 Kokia drynarioides strain JFW-HI SEQ_117918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47191

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
880--933
23
2.3
23
93
0
90
14
20
25
38
1.91
880--953
23
3.2
23
86
7
89
16
18
25
39
1.91
892--982
46
1.9
46
82
10
112
14
20
25
39
1.90
2579--2646
8
8.0
8
79
11
64
17
2
0
79
0.86
2579--2604
6
4.3
6
100
0
52
15
0
0
84
0.62
2596--2644
4
11.8
4
79
16
55
18
4
0
77
0.92
4194--4238
19
2.4
19
81
7
56
37
0
4
57
1.19
5046--5075
16
1.9
16
93
6
53
16
13
0
70
1.18
5041--5095
22
2.5
22
85
8
69
14
10
1
72
1.19
5930--5968
19
2.2
18
90
9
62
53
5
2
38
1.37
5964--6001
18
2.2
17
86
9
51
50
0
0
50
1.00
6404--6436
10
3.4
10
83
8
50
54
0
6
39
1.25
9094--9129
7
5.1
7
100
0
72
27
27
13
30
1.94
9444--9517
32
2.3
33
83
2
96
27
4
4
64
1.29
11288--11357
36
2.0
35
86
8
97
44
12
11
31
1.78
11372--11399
2
14.0
2
100
0
56
50
0
0
50
1.00
17041--17085
18
2.5
18
100
0
90
26
17
22
33
1.96
21293--21366
20
3.6
19
68
21
60
37
8
14
39
1.76
21302--21385
42
2.0
42
97
0
159
40
8
11
39
1.72
21608--21728
20
6.1
19
72
12
84
41
18
24
15
1.89
25303--25336
12
3.0
12
91
8
54
58
8
23
8
1.56
26107--26140
18
1.9
17
88
5
50
50
2
20
26
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26779--26949
58
2.9
59
80
5
195
25
17
13
43
1.85
27116--27299
89
2.1
89
80
4
201
46
13
15
24
1.81
27164--27299
31
4.5
31
71
8
93
47
10
15
27
1.78
29119--29147
4
7.2
4
100
0
58
75
0
0
24
0.80
34283--34315
2
16.5
2
100
0
66
51
0
0
48
1.00
35448--35505
27
2.2
26
81
6
71
29
10
5
55
1.55
35457--35517
27
2.3
27
97
0
113
27
6
6
59
1.48
41068--41245
92
1.9
92
83
2
232
34
10
12
42
1.77
45904--45965
30
2.1
30
93
0
106
25
1
16
56
1.49

Tables:   1

The End!