Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004493.1 Kokia drynarioides strain JFW-HI SEQ_117926, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21715

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
320--395
38
2.0
38
97
0
143
53
9
21
15
1.69
6423--6474
21
2.4
22
87
6
70
80
0
11
7
0.89
6432--6482
16
3.1
16
86
8
59
78
0
15
5
0.93
7443--7652
50
4.3
50
70
14
125
33
16
32
17
1.92
7914--8146
39
6.0
39
77
6
179
25
27
18
29
1.98
7908--8137
78
2.9
77
80
7
243
25
27
18
29
1.98
7914--8145
117
2.0
117
84
1
304
25
26
18
29
1.98
8529--8701
48
3.6
48
79
7
199
35
13
25
25
1.92
8529--8702
96
1.8
96
88
2
269
36
13
25
25
1.92
8625--9199
207
2.8
207
81
3
636
37
16
21
24
1.94
9127--9250
48
2.6
48
85
2
169
35
11
28
25
1.90
9175--9343
85
2.0
85
85
2
232
37
13
23
25
1.92
9040--9332
133
2.2
133
88
1
426
35
14
25
24
1.93
8877--9905
341
2.9
339
78
10
1105
37
15
21
24
1.93
9255--9347
48
1.9
49
80
6
109
39
13
21
24
1.90
9309--9651
160
2.2
159
85
1
472
39
17
18
24
1.92
9469--9912
206
2.2
206
87
2
649
38
15
20
25
1.92
11953--12070
31
3.9
30
83
4
139
34
27
1
35
1.67
11936--12078
61
2.4
62
81
8
179
34
23
2
39
1.67
14959--15024
20
3.3
20
69
12
64
60
27
1
10
1.38
14936--15026
39
2.3
39
94
0
155
54
26
1
17
1.49
16397--16545
23
6.4
23
82
3
165
34
4
14
45
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16409--16545
46
3.0
45
89
1
184
34
5
14
45
1.67
16538--16630
10
8.1
11
71
17
57
38
3
19
38
1.68
16538--16715
58
3.1
58
85
0
230
38
5
18
38
1.73
16545--16694
59
2.6
59
86
1
221
38
4
18
38
1.71
19092--19304
23
9.2
23
87
2
275
31
5
14
48
1.66

Tables:   1

The End!