Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004501.1 Kokia drynarioides strain JFW-HI SEQ_117942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58139

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2469--2712
22
10.7
22
91
5
317
9
25
26
38
1.87
2469--2712
47
5.3
44
90
4
317
9
25
26
38
1.87
2716--2769
25
2.2
25
86
3
74
11
29
14
44
1.80
6473--6507
17
2.1
17
89
5
54
57
0
2
40
1.14
7889--7947
7
9.0
7
75
19
56
54
0
0
45
0.99
14061--14190
53
2.4
54
88
2
181
34
23
16
25
1.95
14061--14190
27
4.8
27
91
2
181
34
23
16
25
1.95
15285--15719
215
2.0
215
95
0
771
36
17
7
39
1.77
16010--16063
9
5.9
9
78
20
58
33
0
1
64
1.04
16001--16077
17
3.9
20
71
13
61
36
0
1
62
1.04
17320--17366
20
2.3
20
96
0
85
61
10
0
27
1.29
21830--21880
23
2.2
23
82
3
66
66
17
5
9
1.40
28786--28827
21
2.0
21
85
0
57
30
4
16
47
1.67
30820--31136
156
2.0
156
98
0
607
35
11
11
41
1.78
42727--42763
18
2.1
18
89
0
56
10
21
21
45
1.82
47089--47118
16
1.9
15
93
6
51
6
26
0
66
1.16
52706--52747
15
2.5
17
85
14
61
59
0
0
40
0.97
52619--52780
86
2.0
83
82
10
199
48
1
0
49
1.11
52616--52794
85
2.1
83
80
12
197
46
3
1
48
1.25
55865--55934
30
2.3
30
95
0
122
22
17
20
40
1.92
56864--56890
5
5.4
5
100
0
54
18
81
0
0
0.69

Tables:   1

The End!