Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004578.1 Kokia drynarioides strain JFW-HI SEQ_118066, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112507

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41--84
18
2.4
19
85
7
56
0
40
0
59
0.98
53--111
16
4.0
15
81
16
70
0
32
0
67
0.91
55--116
4
15.8
4
77
15
58
0
29
0
70
0.87
55--127
11
6.3
11
78
10
56
1
28
0
69
0.96
73--127
11
5.0
11
82
10
60
1
27
0
70
0.97
4588--4630
19
2.3
19
84
8
52
20
2
2
74
1.04
6741--6778
14
2.8
14
84
15
53
44
2
5
47
1.39
12079--12148
31
2.3
31
92
0
113
27
18
14
40
1.89
12668--12733
35
1.9
35
81
6
82
40
3
3
53
1.32
15664--15688
2
12.5
2
100
0
50
52
0
48
0
1.00
16775--16801
3
9.0
3
100
0
54
33
0
33
33
1.58
18149--18174
2
13.0
2
100
0
52
0
50
0
50
1.00
19796--19820
3
8.3
3
100
0
50
68
32
0
0
0.90
21926--21950
2
12.5
2
100
0
50
0
48
0
52
1.00
28967--28996
4
7.5
4
100
0
60
26
0
23
50
1.50
34398--34463
17
4.1
16
78
13
55
60
0
1
37
1.06
34398--34437
16
2.4
17
87
8
55
62
0
0
37
0.95
38190--38248
31
2.0
30
86
6
84
42
16
8
32
1.79
38170--38249
31
2.7
28
79
11
79
45
16
7
31
1.75
39829--39871
3
14.3
3
100
0
86
32
0
32
34
1.58
41011--41062
27
2.0
25
82
10
61
48
9
3
38
1.54
41001--41062
30
2.2
29
88
11
94
46
9
3
40
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41155--41233
36
2.2
37
81
4
90
46
2
1
49
1.23
41210--41299
44
2.0
44
86
0
126
36
4
6
52
1.48
43237--43266
12
2.5
12
88
0
51
40
0
60
0
0.97
43760--43787
6
4.7
6
100
0
56
85
0
0
14
0.59
53423--53480
27
2.1
27
81
15
66
56
5
1
36
1.32
53714--53761
23
2.1
23
92
0
78
58
10
0
31
1.32
64957--64989
13
2.5
13
100
0
66
30
6
51
12
1.63
65141--65182
17
2.5
17
80
0
57
30
0
7
61
1.22
66502--66544
17
2.6
16
85
7
50
60
2
0
37
1.10
68831--68886
27
2.0
27
82
3
67
48
1
3
46
1.30
69604--69695
17
5.3
16
70
15
58
20
4
5
69
1.26
70808--70837
14
2.2
13
94
5
51
30
0
0
70
0.88
71736--71768
14
2.3
15
89
5
50
42
6
3
48
1.43
87107--87153
25
1.9
24
83
12
60
57
4
4
34
1.38
98373--98412
21
1.9
21
89
0
62
55
12
2
30
1.50
98471--98552
30
2.7
32
76
16
84
68
8
0
23
1.17
100453--100529
35
2.1
37
83
4
95
35
0
1
63
1.03
100452--100531
37
2.2
38
80
8
94
35
0
1
63
1.02
107481--107831
180
2.0
179
94
2
616
23
15
17
42
1.88
108487--108520
18
1.9
17
88
5
50
26
0
11
61
1.30

Tables:   1

The End!