Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004596.1 Kokia drynarioides strain JFW-HI SEQ_118091, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34062

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
514--1082
49
11.6
49
76
3
444
34
15
31
18
1.93
504--1082
99
5.9
99
77
5
476
34
15
31
19
1.93
664--1071
147
2.8
145
86
4
523
33
15
32
19
1.93
1292--1686
122
3.2
121
80
2
389
36
16
22
24
1.94
2139--2176
16
2.4
16
90
0
58
57
0
0
42
0.98
2785--2994
114
1.8
115
92
1
359
35
15
20
29
1.93
3555--3602
17
2.7
19
84
12
59
18
10
0
70
1.15
3938--3963
11
2.4
11
100
0
52
7
0
15
76
0.99
7221--7268
23
2.0
25
88
8
73
52
8
6
33
1.57
8757--8788
15
2.1
15
100
0
64
37
6
28
28
1.81
9008--9120
45
2.5
46
75
4
122
38
24
23
13
1.90
9011--9120
23
4.9
22
77
5
103
37
25
23
13
1.92
8983--9132
23
6.5
22
76
11
81
38
23
24
13
1.91
9265--10566
432
3.0
432
98
0
2469
31
20
7
40
1.81
13051--13156
54
2.0
54
86
0
149
20
30
22
26
1.98
13070--13178
54
2.0
54
85
3
148
20
29
24
25
1.99
13872--13978
33
3.2
33
90
0
169
40
32
11
15
1.83
17100--17139
5
7.0
6
78
21
50
45
0
2
52
1.14
17095--17139
23
2.0
23
95
0
81
42
2
2
53
1.25
17100--17195
11
8.5
11
72
21
51
45
0
5
48
1.24
17139--17221
25
3.1
25
69
24
78
46
0
8
44
1.33
17109--17221
56
2.0
56
100
0
226
46
0
7
46
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19305--19329
2
12.5
2
100
0
50
52
0
0
48
1.00
22527--22586
31
1.9
31
96
0
111
50
11
23
15
1.76
23437--23594
82
1.9
82
84
0
208
39
10
27
22
1.87
23570--23655
41
2.1
41
86
4
120
37
11
25
25
1.90
23570--23667
41
2.4
41
84
3
117
34
11
25
28
1.90
27091--27215
66
1.9
66
81
6
155
40
16
25
17
1.91
27483--27588
43
2.5
43
86
9
137
30
16
27
25
1.97
29489--29565
30
2.6
30
85
0
91
27
16
25
29
1.97
29500--29667
36
5.0
36
64
17
101
28
16
26
27
1.97

Tables:   1

The End!