Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01004627.1 Kokia drynarioides strain JFW-HI SEQ_118143, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2618
ACGTcount: A:0.29, C:0.14, G:0.21, T:0.36


Found at i:1849 original size:6 final size:6

Alignment explanation


    Indices: 1838--1863  Score: 52
    Period size: 6  Copynumber: 4.3  Consensus size: 6

       1828 ATTTGGGATG

                                          
       1838 GTCATA GTCATA GTCATA GTCATA GT
          1 GTCATA GTCATA GTCATA GTCATA GT

       1864 GCTTGTAGTG


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   20  1.00

ACGTcount: A:0.31, C:0.15, G:0.19, T:0.35


Consensus pattern (6 bp):   
GTCATA

Done.