Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004630.1 Kokia drynarioides strain JFW-HI SEQ_118152, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  128916

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
487--567
39
2.1
39
100
0
162
39
14
7
38
1.75
8120--8163
19
2.3
19
84
4
52
34
20
4
40
1.73
17110--17400
30
9.9
30
78
7
267
36
1
25
37
1.66
20009--20173
39
4.3
38
76
7
145
23
16
33
26
1.96
19994--20173
78
2.3
78
84
1
229
23
17
31
27
1.97
28385--28418
17
2.0
17
94
0
59
47
20
5
26
1.73
32352--32457
29
3.7
28
71
12
90
37
2
20
38
1.68
32260--32457
88
2.2
89
80
9
201
37
4
21
37
1.72
32416--32667
30
8.5
30
70
9
115
40
3
21
34
1.72
32435--32639
89
2.3
89
83
3
270
40
3
20
34
1.71
32435--32653
30
7.4
30
75
4
147
39
4
21
33
1.74
34969--35003
11
3.2
11
87
0
52
20
2
8
68
1.29
36911--36993
29
2.9
27
70
19
71
53
0
12
34
1.38
36919--36992
21
3.8
20
74
10
64
50
0
13
36
1.42
36911--36993
19
4.3
20
72
17
68
53
0
12
34
1.38
39329--39353
3
8.3
3
100
0
50
68
0
0
32
0.90
42702--42769
31
2.2
32
81
7
77
57
5
1
35
1.32
42717--42780
29
2.1
30
82
5
76
57
7
0
34
1.27
44163--44448
123
2.3
123
79
4
319
48
17
12
21
1.79
51724--52124
29
13.8
29
74
13
262
35
1
25
36
1.68
51726--52129
57
6.9
58
75
11
278
35
1
25
37
1.67
51758--52040
86
3.3
85
78
8
252
35
1
25
37
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53193--53218
11
2.4
11
100
0
52
38
0
0
61
0.96
53973--54062
17
5.3
17
80
0
99
56
7
2
33
1.40
58791--59099
169
1.8
167
89
1
483
24
17
19
38
1.93
59124--59150
9
3.0
9
100
0
54
55
0
44
0
0.99
63428--63452
3
8.3
3
100
0
50
32
32
0
36
1.58
69290--69322
17
2.0
17
88
5
50
33
9
0
57
1.30
74945--74991
23
2.0
24
84
12
62
63
0
4
31
1.13
75049--75079
10
3.1
10
95
0
53
87
0
12
0
0.55
77718--77748
2
15.5
2
100
0
62
51
0
0
48
1.00
81597--81638
3
14.0
3
100
0
84
66
0
0
33
0.92
82959--82996
2
19.0
2
100
0
76
50
0
50
0
1.00
90616--90650
17
1.9
19
88
11
56
25
20
2
51
1.61
90727--90758
12
2.7
12
95
0
55
28
40
6
25
1.79
98621--98654
2
17.0
2
93
0
59
52
0
0
47
1.00
100201--100226
11
2.4
11
100
0
52
0
0
7
92
0.39
109277--109332
26
2.2
24
84
6
67
30
25
10
33
1.90
110997--111109
40
2.8
40
79
0
109
29
17
17
35
1.93
111053--111238
40
4.7
40
80
5
196
30
14
17
37
1.90
111056--111238
80
2.3
80
83
1
242
30
14
17
38
1.89
115126--115156
2
15.5
2
100
0
62
51
0
0
48
1.00
122835--123067
114
2.1
113
94
0
403
44
8
17
29
1.78

Tables:   1

The End!