Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004635.1 Kokia drynarioides strain JFW-HI SEQ_118159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  146954

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--513
29
3.2
29
86
3
100
27
11
19
41
1.86
434--535
29
3.6
29
86
4
127
28
11
18
41
1.86
483--530
14
3.4
14
76
2
51
31
12
14
41
1.83
6789--6885
40
2.4
40
91
0
149
21
23
10
44
1.83
6911--7058
43
3.5
43
82
7
169
31
23
10
34
1.89
22306--22402
26
3.7
26
85
0
140
38
26
15
19
1.92
22386--22497
41
2.7
41
81
0
134
40
27
16
15
1.89
33167--33285
43
2.8
43
75
3
125
30
8
25
36
1.85
35446--35501
17
3.2
17
83
14
69
33
26
12
26
1.92
36115--36144
9
3.4
9
95
4
53
70
10
20
0
1.16
37654--37696
20
2.1
20
82
4
50
46
13
2
37
1.57
46578--46746
34
5.0
34
76
8
132
38
6
21
33
1.79
64456--64492
17
2.2
17
90
0
56
72
0
8
18
1.08
66690--66718
2
14.5
2
100
0
58
51
48
0
0
1.00
71488--71549
18
3.5
18
93
2
99
16
6
12
64
1.47
72991--73034
23
2.0
22
86
4
61
38
4
34
22
1.75
81897--81959
21
3.0
21
80
13
60
39
25
12
22
1.89
90666--90692
6
4.5
6
100
0
54
70
0
0
29
0.88
90671--90717
25
1.9
24
86
4
67
76
2
2
19
0.99
90670--90718
6
8.2
6
88
0
53
73
2
2
22
1.04
90666--90719
12
4.4
12
81
4
63
72
1
1
24
1.05
101798--101833
2
18.0
2
100
0
72
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117574--117620
15
2.8
17
81
12
53
59
6
34
0
1.23
118014--118056
17
2.5
17
88
0
59
16
11
16
55
1.68
128749--128786
14
2.7
14
84
11
51
10
18
2
68
1.30
131069--131139
17
4.1
18
75
10
67
18
15
14
52
1.75
131704--131748
15
3.2
14
84
9
56
77
0
22
0
0.76
136833--136871
13
2.7
16
81
18
50
10
12
0
76
1.01

Tables:   1

The End!