Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01004637.1 Kokia drynarioides strain JFW-HI SEQ_118164, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 817

Length: 1363
ACGTcount: A:0.31, C:0.19, G:0.18, T:0.33


Found at i:137 original size:14 final size:15

Alignment explanation


    Indices: 106--145  Score: 55
    Period size: 14  Copynumber: 2.7  Consensus size: 15

         96 TATCTTTATC

                            
        106 TTATTTATATTCTATT
          1 TTATTTAT-TTCTATT

                           
        122 TTATTTATTTCT-TT
          1 TTATTTATTTCTATT

              *       
        136 TTTTTTATTT
          1 TTATTTATTT

        146 ATCCATCTTC


Statistics
Matches: 23,  Mismatches: 1, Indels: 2
        0.88            0.04        0.08

Matches are distributed among these distances:
  14   11  0.48
  15    4  0.17
  16    8  0.35

ACGTcount: A:0.17, C:0.05, G:0.00, T:0.78


Consensus pattern (15 bp):   
TTATTTATTTCTATT
Done.