Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000464.1 Kokia drynarioides strain JFW-HI SEQ_111336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104568

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
116--154
4
9.8
4
83
10
53
0
23
0
76
0.78
114--158
21
2.2
20
84
7
65
0
26
0
73
0.84
113--165
11
4.9
11
80
13
56
1
24
0
73
0.93
109--163
21
2.5
21
78
21
60
1
25
0
72
0.94
326--381
27
2.0
28
86
10
80
10
30
21
37
1.87
3356--3395
4
10.0
4
100
0
80
25
0
25
50
1.50
3863--3895
16
1.9
17
88
11
50
36
15
24
24
1.93
14575--14621
24
2.0
24
82
0
58
38
2
10
48
1.50
15627--15672
21
2.2
21
84
3
58
67
0
0
32
0.91
17775--17829
26
2.2
25
87
9
76
69
0
0
30
0.89
19590--19701
31
3.7
31
74
17
92
25
16
12
44
1.83
19592--19728
31
4.5
30
73
16
86
26
15
13
45
1.82
19964--20053
31
2.7
33
79
10
112
45
11
17
25
1.81
30050--30087
20
1.9
19
89
5
58
71
0
5
23
1.07
45708--45749
19
2.2
20
87
12
61
42
0
2
54
1.13
53998--54045
23
2.1
22
85
14
62
20
0
2
77
0.88
54012--54070
15
3.9
15
78
6
57
25
1
3
69
1.13
54012--54068
23
2.5
24
83
8
75
24
1
3
70
1.13
64945--64973
7
4.1
7
100
0
58
13
27
17
41
1.87
71252--71312
19
3.2
19
75
24
65
62
0
0
37
0.96
71264--71302
21
1.9
20
89
5
60
58
0
0
41
0.98
74882--74933
16
3.1
16
81
10
68
44
9
17
28
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74956--74981
13
2.0
13
100
0
52
0
15
7
76
0.99
74948--74992
23
1.9
23
86
4
63
0
22
4
73
1.01

Tables:   1

The End!