Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004644.1 Kokia drynarioides strain JFW-HI SEQ_118174, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74377

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1334--1470
45
3.0
45
84
0
166
20
21
24
32
1.97
3343--3391
16
3.2
16
75
16
59
34
0
6
59
1.22
3651--3693
21
2.1
21
86
4
61
58
9
2
30
1.42
4079--4117
4
9.8
4
83
10
53
0
20
0
79
0.73
4057--4117
25
2.4
25
83
5
70
0
27
0
72
0.85
4076--4117
11
3.9
11
79
17
52
0
21
0
78
0.75
4367--4393
11
2.5
11
100
0
54
14
7
7
70
1.32
9845--9884
21
1.9
21
85
10
55
30
15
20
35
1.93
22024--22053
3
10.0
3
92
0
51
36
0
0
63
0.95
23673--23710
2
19.0
2
100
0
76
50
0
0
50
1.00
24878--24924
18
2.4
21
89
10
73
46
0
10
42
1.38
30898--30961
23
2.7
22
83
11
74
65
1
3
29
1.17
39798--39844
17
2.7
18
78
12
53
68
4
4
23
1.26
39809--39844
19
1.9
18
88
5
54
69
5
2
22
1.22
40790--40832
22
2.0
22
86
9
61
55
0
2
41
1.12
41092--41161
23
3.0
23
72
2
68
42
17
10
30
1.81
41250--41283
11
2.9
12
82
8
52
50
11
17
20
1.77
41409--41461
26
2.0
26
96
0
97
33
18
24
22
1.97
44181--44207
2
13.5
2
100
0
54
51
0
0
48
1.00
46992--47070
29
2.7
28
82
7
86
32
5
8
53
1.54
47253--47310
31
1.9
30
82
6
73
43
10
10
36
1.73
48446--48484
16
2.4
17
86
4
53
46
12
0
41
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49804--49894
41
2.2
41
96
0
164
30
21
32
14
1.93
50252--50345
43
2.2
43
88
0
143
25
17
25
31
1.97
53764--53955
96
2.0
96
84
6
255
39
13
18
29
1.89
54174--54236
28
2.2
28
82
2
72
25
9
30
34
1.88
54338--54589
30
8.5
30
83
4
280
35
2
26
35
1.71
54338--54589
59
4.3
58
84
6
292
35
2
26
35
1.71
56364--56388
13
1.9
13
100
0
50
24
12
24
40
1.88
56392--56461
17
4.2
17
88
1
106
54
2
0
42
1.15
56399--56461
6
11.0
6
72
16
53
53
3
0
42
1.16
58699--58789
22
4.4
20
67
29
50
41
2
4
51
1.34
59311--59351
16
2.6
16
84
0
55
43
0
2
53
1.13
59882--59926
23
2.0
23
82
8
56
40
6
6
46
1.56
60376--60408
6
5.5
6
92
0
57
66
15
0
18
1.25
61045--61087
22
2.0
22
90
0
68
20
6
9
62
1.48
61228--61270
17
2.4
18
85
14
63
34
0
4
60
1.17
61228--61275
17
2.8
17
78
15
55
33
0
4
62
1.14
65648--65690
21
2.0
22
90
4
70
51
0
0
48
1.00
65651--65706
17
3.2
17
82
10
60
44
3
0
51
1.18
70498--70705
69
3.0
68
73
13
192
25
27
11
35
1.91

Tables:   1

The End!