Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004669.1 Kokia drynarioides strain JFW-HI SEQ_118217, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99781

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5847--5975
64
2.0
63
96
1
240
24
13
20
42
1.87
11832--11857
4
6.5
4
100
0
52
50
23
0
26
1.50
13958--13998
21
2.0
21
85
9
57
14
0
9
75
1.04
15056--15103
19
2.5
20
80
19
57
47
4
0
47
1.21
20042--20093
25
2.0
25
85
14
70
69
3
0
26
1.06
20068--20114
20
2.4
19
89
3
67
61
6
4
27
1.39
20631--20714
31
2.7
31
83
1
98
22
13
13
51
1.75
23580--23683
42
2.4
43
79
9
115
20
27
14
37
1.91
25542--25895
201
1.8
191
82
8
451
26
25
18
29
1.98
28867--28951
40
2.1
40
86
0
116
22
20
17
40
1.92
29679--29738
29
2.1
29
81
6
68
58
0
5
36
1.20
35334--35384
10
5.0
10
72
13
50
68
1
1
27
1.11
35335--35402
23
3.1
22
78
14
70
67
1
2
27
1.13
37747--37776
15
1.9
16
93
6
53
36
20
26
16
1.93
60467--60492
5
5.2
5
100
0
52
0
61
0
38
0.96
75867--75902
18
2.0
18
94
0
63
50
19
22
8
1.74
79797--79821
2
12.5
2
100
0
50
52
0
48
0
1.00
83187--83280
29
3.2
29
65
5
73
28
17
29
24
1.97
85136--85186
12
4.2
12
75
9
59
1
35
7
54
1.40
94423--94448
6
4.3
6
100
0
52
34
50
15
0
1.45
97498--97528
14
2.2
14
94
0
53
51
3
0
45
1.17
98748--98795
11
4.4
11
81
0
60
41
0
4
54
1.20

Tables:   1

The End!