Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004676.1 Kokia drynarioides strain JFW-HI SEQ_118226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66340

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1374--1424
21
2.5
20
78
9
57
39
27
15
17
1.90
3181--3342
28
5.9
27
76
7
146
19
16
25
38
1.93
3181--3313
55
2.4
56
83
3
171
19
16
25
38
1.92
3181--3330
55
2.7
55
80
4
167
19
18
24
38
1.93
10208--10250
12
3.6
12
83
0
59
65
0
34
0
0.93
10647--10691
17
2.6
17
82
6
56
17
11
11
60
1.59
14236--14338
28
3.7
28
79
7
86
33
25
12
28
1.92
14733--14787
21
2.6
21
80
8
67
34
27
9
29
1.87
15314--15368
18
3.0
19
76
7
60
34
25
18
21
1.96
16449--16623
55
3.2
53
74
12
154
33
21
17
27
1.96
16499--16572
28
2.6
28
77
10
78
35
22
17
24
1.95
16422--16622
112
1.8
110
85
2
285
34
20
17
27
1.95
19370--19438
19
3.5
19
77
11
84
44
17
2
34
1.64
19360--19421
19
3.0
21
72
13
74
38
20
1
38
1.63
19360--19441
41
2.0
41
100
0
164
41
19
2
36
1.65
31032--31073
8
5.0
8
83
11
57
38
0
0
61
0.96
31038--31073
18
2.0
18
94
0
63
36
0
0
63
0.94
31021--31073
26
2.0
28
88
7
83
37
0
0
62
0.96
31011--31079
26
2.5
28
79
6
79
42
0
2
55
1.15
34921--34956
17
2.2
16
90
5
54
19
0
5
75
1.00
37075--37188
50
2.3
50
93
0
192
36
17
13
32
1.88
41228--41266
14
2.9
13
88
11
53
61
0
2
35
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41338--41363
9
2.9
9
100
0
52
57
0
11
30
1.34
44098--44166
21
3.3
21
89
4
104
23
18
10
47
1.79
44515--44565
19
2.7
20
81
9
61
31
0
0
68
0.90
44515--44562
18
2.6
18
83
9
62
31
0
0
68
0.90
50379--50553
86
2.0
86
95
0
314
36
21
16
25
1.94
54598--54634
9
4.0
9
89
3
56
83
0
13
2
0.74
58920--58973
21
2.6
21
80
11
74
22
18
11
48
1.79
62739--62790
20
2.4
21
81
15
61
48
0
7
44
1.31

Tables:   1

The End!