Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004693.1 Kokia drynarioides strain JFW-HI SEQ_118251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56398

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
669--723
23
2.4
23
81
6
67
34
5
7
52
1.52
812--943
68
1.9
69
92
1
221
32
9
22
35
1.86
3790--3881
45
2.0
45
91
0
148
40
11
17
30
1.86
3910--4011
50
2.0
50
94
0
177
46
9
12
31
1.75
5314--5543
66
3.5
65
72
5
176
13
28
17
40
1.87
5314--5731
132
3.2
132
82
3
437
13
26
18
41
1.87
5383--5742
132
2.7
131
84
3
443
14
26
19
40
1.90
7582--7630
14
3.8
13
79
17
57
65
0
0
34
0.93
13104--13130
3
9.0
3
100
0
54
66
0
0
33
0.92
20902--20968
27
2.5
26
78
9
71
49
5
1
43
1.36
20953--20986
17
2.0
17
88
11
52
52
2
0
44
1.16
27150--27204
16
3.5
16
82
9
69
3
25
1
69
1.15
27141--27204
31
2.1
31
85
5
85
4
23
1
70
1.15
28145--28394
132
1.9
133
82
8
314
40
4
11
43
1.61
28751--28800
24
2.0
25
88
7
75
48
6
0
46
1.27
48590--48619
5
6.0
5
92
0
51
83
0
0
16
0.65
51938--51973
3
12.0
3
100
0
72
66
0
0
33
0.92
55372--55573
80
2.5
78
83
3
233
21
18
25
35
1.96

Tables:   1

The End!