Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004704.1 Kokia drynarioides strain JFW-HI SEQ_118269, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59851

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6380--6458
29
2.7
30
88
5
110
46
0
1
51
1.08
7531--7574
23
2.0
22
86
4
61
52
2
0
45
1.13
10846--10882
17
2.2
17
100
0
74
54
5
0
40
1.24
18830--18855
2
13.0
2
100
0
52
50
0
0
50
1.00
19281--19356
31
2.5
29
74
17
75
32
0
0
67
0.91
19313--19387
28
2.6
28
73
10
71
32
2
2
62
1.23
30019--30053
14
2.5
14
86
13
54
48
0
2
48
1.16
30400--30459
30
2.0
29
87
3
84
61
3
1
33
1.22
30806--30841
18
1.9
19
88
5
56
72
0
0
27
0.85
31585--31679
30
3.2
30
92
0
163
57
14
3
24
1.52
35304--35418
57
2.0
57
100
0
230
29
12
16
41
1.84
38782--38835
23
2.3
23
81
9
56
44
0
0
55
0.99
38920--38962
17
2.4
18
76
3
52
34
4
9
51
1.55
40581--40630
22
2.2
23
85
3
66
26
0
6
68
1.13
40571--40641
31
2.3
31
87
4
99
29
0
5
64
1.16
42863--42952
39
2.3
39
86
3
117
48
6
6
37
1.56
48132--48160
3
9.7
3
100
0
58
31
0
0
68
0.89
53426--53485
28
2.1
29
81
9
79
28
10
25
36
1.88
53503--53720
59
3.7
57
79
10
176
34
5
27
32
1.80
53472--53722
30
8.5
30
73
17
181
34
5
27
32
1.79
53548--53722
59
3.0
58
87
6
237
33
5
28
33
1.79
53561--53729
30
5.7
29
82
9
184
34
4
27
34
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54411--54441
2
15.5
2
93
0
53
51
0
0
48
1.00
54507--54694
99
1.9
99
81
4
227
34
24
13
28
1.93
54766--54813
24
2.0
24
83
0
60
20
35
2
41
1.64
54785--54823
17
2.3
17
81
0
51
17
33
0
48
1.48

Tables:   1

The End!