Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004729.1 Kokia drynarioides strain JFW-HI SEQ_118309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  157108

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4438--4475
17
2.3
17
86
4
51
18
2
2
76
1.02
5810--5851
22
1.9
22
100
0
84
42
0
4
52
1.22
5915--5959
21
2.1
21
83
0
54
60
2
4
33
1.29
8871--8985
61
1.9
61
80
7
135
33
18
16
31
1.93
9922--10027
30
3.5
30
81
1
86
60
2
7
29
1.39
11191--11234
20
2.2
20
83
0
52
68
2
4
25
1.20
12580--12745
62
2.7
62
78
5
187
39
15
18
26
1.90
12555--12745
60
3.2
58
77
10
170
41
14
16
28
1.87
15248--15319
36
2.0
36
94
0
126
6
15
26
51
1.68
15408--15505
48
2.0
48
100
0
196
30
15
20
33
1.93
20883--20944
28
2.2
28
83
8
74
46
8
3
41
1.49
21848--21903
21
2.8
20
84
10
69
58
1
0
39
1.08
21852--21903
10
5.1
10
79
11
61
59
1
0
38
1.08
25651--25683
6
5.5
6
100
0
66
66
15
0
18
1.25
27239--27284
15
3.1
15
76
14
51
63
0
0
36
0.95
27342--27381
20
2.0
20
85
0
53
52
5
0
42
1.23
36937--37087
70
2.1
71
92
1
250
24
21
21
33
1.97
45572--46821
361
3.5
361
87
1
1736
34
14
12
39
1.83
50025--50072
22
2.2
21
85
3
60
66
18
2
12
1.33
53636--53670
6
5.7
6
86
6
52
42
0
0
57
0.99
53634--53670
19
1.9
19
94
0
65
43
0
0
56
0.99
53632--53679
25
1.9
25
86
0
69
41
0
2
56
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54623--54647
3
8.3
3
100
0
50
36
0
0
64
0.94
60012--60042
14
2.2
14
94
0
53
22
3
12
61
1.46
64546--64579
13
2.8
12
91
8
52
0
0
8
91
0.43
71163--71220
27
2.2
25
82
8
71
55
3
6
34
1.44
85124--85181
30
1.9
30
92
0
98
29
20
20
29
1.98
84583--87924
823
3.9
830
85
6
4040
34
16
17
31
1.92
94561--94611
22
2.5
21
81
12
61
52
0
0
47
1.00
98520--98566
24
2.0
22
84
16
58
65
2
0
31
1.04
98516--98568
24
2.4
21
76
17
54
66
1
0
32
1.03
109992--110428
238
1.8
238
96
0
811
38
10
15
36
1.81
124267--124324
27
2.1
28
87
3
82
44
3
0
51
1.18
124747--124823
31
2.5
31
86
0
100
45
10
15
28
1.79
128869--128912
18
2.4
19
85
11
65
36
0
0
63
0.95
132332--132401
29
2.3
29
85
4
86
31
10
17
41
1.82
132354--132411
29
2.0
30
89
3
91
29
6
15
48
1.71
132554--132633
31
2.7
28
75
16
81
40
11
12
36
1.79
146895--146919
10
2.5
10
100
0
50
0
8
0
92
0.40
153675--153744
21
3.2
21
65
23
54
30
8
14
47
1.74

Tables:   1

The End!