Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01004774.1 Kokia drynarioides strain JFW-HI SEQ_118384, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 741

Length: 1236
ACGTcount: A:0.36, C:0.18, G:0.18, T:0.29


Found at i:757 original size:3 final size:3

Alignment explanation


    Indices: 751--776  Score: 52
    Period size: 3  Copynumber: 8.7  Consensus size: 3

        741 AGAAGAAACA

                                              
        751 ATG ATG ATG ATG ATG ATG ATG ATG AT
          1 ATG ATG ATG ATG ATG ATG ATG ATG AT

        777 TTTAGAATAA


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   23  1.00

ACGTcount: A:0.35, C:0.00, G:0.31, T:0.35


Consensus pattern (3 bp):   
ATG

Done.