Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004776.1 Kokia drynarioides strain JFW-HI SEQ_118386, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86098

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--234
96
2.4
96
94
0
396
23
2
49
24
1.64
1--234
48
4.9
48
72
12
201
23
2
49
24
1.64
1277--1314
19
2.0
19
85
10
51
55
5
7
31
1.51
13140--13179
21
1.9
21
89
0
62
42
12
7
37
1.71
13279--13319
19
2.2
19
90
0
64
46
0
0
53
1.00
13286--13327
20
2.2
19
86
4
57
40
2
0
57
1.12
15974--16002
4
7.2
4
100
0
58
24
0
24
51
1.48
41288--41746
229
2.0
229
100
0
918
37
13
14
33
1.86
55537--55564
2
14.0
2
100
0
56
50
0
0
50
1.00
59843--59873
7
4.4
7
100
0
62
12
0
58
29
1.35
69163--69202
18
2.3
18
86
4
55
57
2
5
35
1.34
71078--71114
18
2.0
19
89
5
58
24
2
0
72
0.97
71102--71170
33
2.0
34
81
15
81
39
2
2
55
1.30
81579--81604
3
8.7
3
100
0
52
34
34
30
0
1.58
83338--83397
28
2.1
29
84
6
77
31
5
1
61
1.27

Tables:   1

The End!