Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01004788.1 Kokia drynarioides strain JFW-HI SEQ_118405, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 14708
ACGTcount: A:0.31, C:0.15, G:0.21, T:0.33


Found at i:12439 original size:13 final size:13

Alignment explanation


    Indices: 12421--12445  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

      12411 TAAGTATGAA

                         
      12421 ATACTTAATATGC
          1 ATACTTAATATGC

                        
      12434 ATACTTAATATG
          1 ATACTTAATATG

      12446 ACACAAAAGA


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.40, C:0.12, G:0.08, T:0.40


Consensus pattern (13 bp):   
ATACTTAATATGC
Done.