Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004791.1 Kokia drynarioides strain JFW-HI SEQ_118415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111737

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--316
86
3.7
85
90
3
463
39
4
5
50
1.46
1939--1983
24
1.9
23
86
13
65
42
4
2
51
1.34
3827--3888
30
2.1
30
82
11
74
37
9
8
45
1.67
5012--5065
17
3.5
17
66
23
55
44
18
3
33
1.67
4993--5069
29
2.7
29
100
0
154
49
15
3
31
1.63
6624--6649
12
2.2
12
100
0
52
30
0
0
69
0.89
14169--14207
2
20.0
2
94
5
71
48
0
0
51
1.00
14862--14900
19
2.0
20
85
14
55
56
2
0
41
1.13
23639--23695
22
2.6
21
78
8
60
26
3
1
68
1.15
23665--23693
11
2.6
11
100
0
58
34
0
0
65
0.93
23643--23725
33
2.5
34
80
3
89
32
3
2
61
1.26
25027--25098
36
2.0
36
94
0
126
30
5
13
50
1.65
26961--27028
16
4.2
16
67
14
50
38
1
0
60
1.06
26967--27016
21
2.3
20
81
18
57
40
2
0
58
1.10
36860--36915
2
28.0
2
96
0
103
50
1
0
48
1.11
46405--46441
18
2.1
18
100
0
74
21
21
16
40
1.91
51934--51996
26
2.4
26
84
5
74
49
0
0
50
1.00
51896--52013
61
2.0
61
86
5
170
51
0
0
46
1.12
52252--52367
53
2.2
54
80
10
141
25
36
18
18
1.95
61920--61966
19
2.5
19
96
0
85
53
8
27
10
1.64
64776--64845
30
2.4
30
78
2
79
50
7
12
30
1.67
69721--69761
22
1.9
21
85
5
55
36
2
7
53
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69891--69944
22
2.5
21
82
11
56
40
14
1
42
1.57
71060--71217
54
2.9
53
72
11
142
33
16
24
25
1.96
75933--75966
3
11.3
3
93
0
59
64
0
35
0
0.94
82999--83052
4
13.5
4
88
0
72
27
3
1
66
1.19
84366--84447
37
2.2
37
97
0
155
30
15
17
36
1.91
85805--85843
15
2.5
15
83
8
51
69
5
7
17
1.32
86317--86359
12
3.6
12
80
0
50
72
16
2
9
1.21
86317--86380
24
2.7
24
77
0
65
67
18
6
7
1.38
88674--88727
24
2.2
25
83
9
67
12
42
3
40
1.61
90511--90595
6
14.2
6
79
4
64
17
47
0
35
1.48
90525--90565
3
13.7
3
84
0
55
24
41
0
34
1.55
90912--90946
18
1.9
18
88
0
52
8
48
0
42
1.33
96384--96453
35
2.0
35
97
0
131
34
21
22
21
1.97
97892--97967
31
2.6
28
80
13
73
40
3
1
53
1.27
98639--98668
14
2.1
14
93
0
51
26
0
3
70
1.03
104169--104218
19
2.7
19
73
14
50
48
0
2
50
1.12
104814--105012
102
2.0
102
97
0
380
45
9
15
29
1.78
106578--106621
19
2.2
21
84
11
58
36
0
6
56
1.26
111713--111737
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!