Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004834.1 Kokia drynarioides strain JFW-HI SEQ_118477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  141300

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11302--11692
43
9.1
43
71
6
173
40
20
16
22
1.91
13659--13750
46
2.0
46
93
0
157
43
11
21
22
1.85
21241--21400
41
3.8
41
81
2
149
39
10
23
26
1.87
29742--29798
7
7.4
7
79
14
51
78
0
21
0
0.74
29749--29796
25
1.9
25
83
8
62
75
0
25
0
0.81
31607--31840
127
1.8
126
87
0
342
39
23
14
22
1.91
31560--31840
43
6.6
43
73
6
207
38
21
15
23
1.92
35465--35557
46
2.0
46
83
4
116
46
7
15
31
1.73
41329--41353
11
2.3
11
100
0
50
40
0
0
60
0.97
41985--42039
29
1.9
28
81
3
65
43
3
1
50
1.30
51007--51061
27
2.0
27
92
0
92
20
23
34
21
1.97
55879--55941
27
2.3
27
94
2
108
57
0
36
6
1.24
62403--62455
27
2.0
27
92
0
88
20
1
15
62
1.42
62640--62677
17
2.3
17
86
13
53
55
0
2
42
1.14
64566--64628
27
2.3
27
88
0
90
25
19
33
22
1.97
64991--65239
26
9.6
26
91
0
363
29
2
8
59
1.42
65234--65275
14
2.9
15
75
13
52
23
0
30
45
1.53
65235--65275
21
2.0
21
85
9
57
24
0
31
43
1.54
92950--93030
22
3.7
22
93
0
135
39
17
12
30
1.86
95126--95171
19
2.4
19
85
10
58
54
6
2
36
1.39
95869--95910
17
2.4
18
80
4
50
54
14
2
28
1.52
104730--104756
5
5.4
5
100
0
54
62
0
0
37
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
123722--123753
2
16.0
2
100
0
64
50
0
0
50
1.00
126173--126618
195
2.3
194
79
7
451
29
19
24
25
1.99
131622--131816
52
3.8
51
84
4
230
27
13
25
33
1.94
132307--132359
24
2.2
24
100
0
106
32
5
20
41
1.76

Tables:   1

The End!