Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004870.1 Kokia drynarioides strain JFW-HI SEQ_118540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119711

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5679--5711
17
1.9
17
100
0
66
69
18
6
6
1.30
9405--9449
14
3.3
14
80
19
51
37
0
2
60
1.09
29474--29518
23
2.0
23
86
0
63
35
6
2
55
1.38
40537--40563
6
4.5
6
100
0
54
18
0
18
62
1.32
44082--44116
17
2.0
18
88
5
54
14
14
0
71
1.15
44642--44682
15
2.5
17
80
11
59
65
0
0
34
0.93
45350--45378
5
6.0
5
92
8
51
37
0
0
62
0.96
49202--49231
16
1.9
15
93
6
51
66
0
0
33
0.92
50324--50381
24
2.5
23
81
10
73
51
0
1
46
1.11
52870--52903
3
11.3
3
100
0
68
0
32
0
67
0.91
55923--55984
31
2.0
31
84
9
83
38
9
6
45
1.63
56935--56974
21
1.9
21
94
0
71
55
15
15
15
1.71
56811--57160
168
2.1
169
86
3
490
44
11
12
32
1.78
57077--57139
21
3.0
21
86
11
78
58
9
12
19
1.61
58490--58543
20
2.7
20
88
0
72
64
9
9
16
1.47
59577--59613
19
2.0
19
94
5
67
24
10
10
54
1.67
61431--61467
5
7.4
5
100
0
74
18
21
40
18
1.91
62845--62877
14
2.3
15
94
5
59
24
6
0
69
1.10
73113--73143
1
31.0
1
100
0
62
0
0
0
100
0.00
73154--73182
1
29.0
1
100
0
58
0
0
0
100
0.00
88397--88432
18
1.9
19
88
5
56
30
5
8
55
1.52
89569--89683
43
2.6
43
76
6
106
69
17
4
8
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89622--89737
34
3.3
35
70
16
96
73
16
5
5
1.20
89675--89729
24
2.3
24
84
6
67
72
16
5
5
1.22
92239--92282
17
2.4
19
85
14
58
50
2
4
43
1.35
109277--109345
30
2.3
31
87
2
95
20
7
17
55
1.65
113374--113419
23
2.0
23
83
8
58
43
8
6
41
1.61
113374--113418
24
1.9
24
86
4
65
42
8
6
42
1.62
113864--113897
13
2.6
13
90
0
50
47
2
0
50
1.16
116143--116210
28
2.5
27
74
13
68
61
0
1
36
1.05
117126--117150
3
8.3
3
100
0
50
68
0
0
32
0.90

Tables:   1

The End!