Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004933.1 Kokia drynarioides strain JFW-HI SEQ_118636, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39425

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--589
3
30.7
3
75
8
84
38
1
1
59
1.11
494--589
12
8.4
12
79
13
96
38
1
1
59
1.11
1246--1315
17
4.1
17
84
0
77
54
5
1
38
1.33
2357--2638
23
12.2
23
81
11
290
11
26
23
38
1.89
2358--2640
115
2.4
115
91
2
460
11
26
23
38
1.89
6056--6094
19
2.1
19
85
0
51
41
2
33
23
1.68
9344--9388
22
2.0
22
95
0
81
17
17
17
46
1.84
15307--15383
36
2.1
36
87
0
109
36
27
9
27
1.87
19413--19444
3
10.7
3
93
0
55
62
3
0
34
1.11
20093--20152
17
3.5
17
84
4
75
55
3
3
38
1.33
20090--20140
18
2.9
18
88
2
77
50
1
3
43
1.31
20602--20703
39
2.6
39
95
0
177
24
18
29
27
1.98
20651--20939
78
3.7
78
85
2
384
23
19
32
24
1.98
20690--20939
39
6.4
39
72
6
175
24
20
32
23
1.98
33281--33345
29
2.2
29
83
0
76
29
3
29
38
1.72
33299--33580
29
9.5
30
79
6
215
35
4
24
35
1.76
33328--33579
59
4.3
57
78
6
209
36
4
23
36
1.75
33299--33617
30
10.8
29
77
5
203
35
4
23
36
1.76
34656--34682
3
9.0
3
100
0
54
33
0
0
66
0.92
35372--35436
6
11.3
6
75
15
57
56
3
1
38
1.24
35372--35465
17
5.5
17
88
2
134
58
5
1
35
1.28
35372--35465
35
2.7
34
90
1
134
58
5
1
35
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37454--37494
14
2.8
15
86
13
59
58
12
0
29
1.34
39133--39213
5
15.2
5
77
16
58
74
0
7
18
1.05
39124--39195
6
11.7
6
77
14
58
77
0
4
18
0.92
39111--39200
30
2.9
29
79
15
76
75
0
4
20
0.97
39133--39222
35
2.3
38
80
16
98
74
1
7
16
1.11

Tables:   1

The End!