Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004935.1 Kokia drynarioides strain JFW-HI SEQ_118641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25037

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1564--1737
91
1.9
91
89
2
269
35
2
25
36
1.69
1551--1753
30
6.7
30
85
2
219
37
1
25
35
1.67
8769--9079
60
5.2
60
84
5
346
36
23
0
40
1.59
8706--9079
30
12.6
30
77
10
308
35
23
1
39
1.65
15192--15883
49
14.1
49
70
11
434
36
18
25
19
1.94
15203--15901
98
7.1
98
86
1
925
37
18
25
19
1.94
16818--16865
24
2.0
24
83
4
60
45
33
2
18
1.61
18333--18604
30
9.1
29
82
7
260
37
26
0
35
1.57
18333--18621
60
4.8
60
82
7
320
37
26
0
35
1.60
18406--18629
30
7.4
30
86
3
288
37
26
0
35
1.61
20415--20444
14
2.1
15
93
6
53
40
0
16
43
1.48
21751--21837
31
2.9
31
79
3
88
39
12
12
35
1.81
23107--23167
25
2.4
24
81
10
68
55
0
0
44
0.99
23470--23508
18
2.2
18
86
9
53
76
15
0
7
0.99
23811--23868
29
2.0
30
86
3
82
31
6
15
46
1.72
24021--24083
33
2.0
30
82
14
74
38
14
7
39
1.75
24334--24382
21
2.2
22
82
10
55
51
0
10
38
1.36

Tables:   1

The End!