Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004944.1 Kokia drynarioides strain JFW-HI SEQ_118655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62882

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
479--787
29
10.5
30
80
10
309
36
26
2
34
1.71
479--761
58
4.8
59
86
4
353
36
27
2
33
1.70
479--787
59
5.2
60
82
9
352
36
26
2
34
1.71
479--902
58
7.3
59
79
9
315
35
25
4
34
1.76
2224--2430
103
2.0
103
97
0
387
34
9
23
32
1.87
4611--4647
3
12.3
3
100
0
74
67
0
0
32
0.91
9156--9219
13
4.6
13
74
14
56
84
1
14
0
0.70
9160--9227
18
3.9
17
75
16
59
82
1
16
0
0.75
9162--9225
21
3.3
19
81
16
69
82
1
15
0
0.74
9161--9219
20
2.7
23
80
19
74
83
1
15
0
0.74
9156--9228
29
2.5
30
82
6
96
83
1
15
0
0.71
9156--9217
18
3.3
18
84
10
72
83
1
14
0
0.71
10340--10478
49
2.8
48
76
4
134
41
17
19
22
1.91
10503--10833
45
7.3
44
85
2
367
32
27
16
24
1.96
10486--10833
135
2.5
134
83
4
412
33
27
15
24
1.95
11267--11318
22
2.3
23
83
9
63
32
7
9
50
1.64
11532--11575
3
14.7
3
100
0
88
31
0
0
68
0.90
11598--11639
4
11.0
4
82
10
52
19
0
4
76
0.96
11657--11732
6
12.5
6
72
22
61
19
0
2
77
0.88
11599--11766
19
8.3
19
67
23
78
20
2
4
72
1.17
11666--11830
28
5.4
29
70
20
88
21
3
3
71
1.17
11600--11799
15
13.9
14
68
24
71
21
3
4
71
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11694--11792
26
3.7
26
75
11
83
18
4
4
73
1.15
11775--11866
33
2.9
31
83
13
107
27
5
1
66
1.20
11775--11866
32
2.9
31
84
10
114
27
5
1
66
1.20
11913--11953
16
2.5
17
84
11
59
29
2
2
65
1.18
14047--14092
21
2.2
21
88
7
67
13
34
26
26
1.92
18310--18372
31
2.0
31
93
0
108
20
14
17
47
1.82
21734--21758
13
1.9
13
100
0
50
68
0
0
32
0.90
23078--23111
18
1.9
17
88
5
50
38
0
5
55
1.24
23682--23723
21
2.0
21
85
0
57
40
9
14
35
1.78
24699--24742
6
7.3
6
100
0
88
0
0
47
52
1.00
29486--29608
61
2.0
61
100
0
246
51
4
17
26
1.66
35887--35959
25
2.9
25
81
4
67
54
1
2
41
1.23
38551--38897
178
2.0
177
86
4
493
24
12
19
43
1.86
39844--39942
31
3.2
31
71
13
87
23
22
9
45
1.80
39834--39999
60
2.7
61
86
0
226
23
17
11
47
1.80
42790--42886
43
2.3
43
87
3
133
42
5
24
27
1.76
46036--46070
11
3.2
11
91
0
52
20
2
0
77
0.90
46048--46098
18
2.8
18
81
3
57
31
0
1
66
1.03
46794--46822
2
14.5
2
100
0
58
51
0
0
48
1.00
50315--50355
20
2.0
20
85
9
55
68
9
0
21
1.18
51567--51613
9
5.3
9
82
12
62
23
0
0
76
0.78
51564--51613
19
2.7
19
85
14
61
24
0
0
76
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56262--56299
15
2.6
15
87
4
51
44
0
0
55
0.99

Tables:   1

The End!