Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004945.1 Kokia drynarioides strain JFW-HI SEQ_118656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73814

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12225--12253
3
9.7
3
100
0
58
68
0
0
31
0.89
23915--24013
31
3.2
31
72
13
112
21
8
10
60
1.54
23894--24025
63
2.1
64
97
2
257
23
9
7
59
1.55
23929--24024
31
3.1
31
71
14
97
22
9
7
60
1.52
26060--26154
32
3.1
31
69
25
85
48
7
9
34
1.64
29165--29227
18
3.5
19
73
14
53
33
6
7
52
1.56
29176--29264
18
4.9
18
77
8
74
37
3
7
51
1.48
29215--29266
17
3.0
17
82
2
68
48
0
5
46
1.26
40539--40746
115
1.8
115
84
0
290
32
19
25
21
1.97
40675--40839
86
1.9
85
80
3
188
33
16
27
22
1.96
40608--41625
203
5.1
194
83
6
1180
35
18
23
22
1.96
40664--41627
400
2.4
392
85
4
1249
35
18
23
21
1.96
41983--42063
36
2.2
37
74
14
87
30
4
7
56
1.48
41991--42072
17
4.6
18
79
10
71
35
4
7
52
1.51
42716--42750
15
2.3
15
85
0
52
60
2
2
34
1.26
43790--43943
29
5.2
29
79
6
175
37
26
3
32
1.75
43790--44062
59
4.8
59
80
11
241
36
26
3
34
1.74
43840--44053
110
1.9
110
83
8
274
37
27
3
31
1.74
43961--44052
30
3.1
30
71
10
91
39
23
4
32
1.75
43960--44181
29
7.7
29
68
17
104
34
23
3
38
1.73
43961--44167
58
3.6
59
79
7
167
35
22
3
38
1.73
44410--44594
96
1.9
96
86
4
266
30
18
14
37
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45428--45458
13
2.3
14
94
5
55
67
0
0
32
0.91
55054--55171
59
2.0
57
83
3
146
44
0
2
52
1.20
66207--66236
10
2.8
11
90
10
53
83
0
16
0
0.65
67743--67767
3
8.3
3
100
0
50
32
0
0
68
0.90
71739--71782
19
2.2
21
84
15
58
59
2
0
38
1.10
72473--72530
29
2.0
29
86
3
82
46
15
3
34
1.63
72780--72854
27
2.8
27
95
0
132
2
50
0
46
1.15
72809--72855
20
2.3
21
82
7
62
2
53
0
44
1.12

Tables:   1

The End!