Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004959.1 Kokia drynarioides strain JFW-HI SEQ_118686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96131

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1742--1785
20
2.2
20
87
4
61
47
18
4
29
1.68
1783--1835
18
3.1
17
76
7
54
37
13
7
41
1.72
1757--1820
23
2.9
21
78
15
67
42
15
6
35
1.72
10831--10962
38
3.5
38
81
6
151
33
17
17
31
1.93
10823--10971
38
3.9
38
80
8
144
34
17
17
30
1.93
15453--15564
30
3.8
30
77
5
102
29
2
25
41
1.69
16491--16567
3
25.7
3
79
10
86
33
3
0
62
1.14
17209--17265
12
4.4
12
72
23
53
54
1
1
42
1.21
17216--17265
17
2.9
17
78
0
55
56
2
2
40
1.22
17737--17849
48
2.4
48
89
3
174
23
25
14
37
1.92
17788--18356
209
2.7
209
88
0
789
22
20
19
37
1.94
21639--21685
23
2.0
23
100
0
94
42
12
21
23
1.87
29988--30101
58
1.9
58
84
8
151
34
7
25
33
1.83
30069--30247
30
5.9
29
82
9
180
32
0
27
39
1.57
30010--30248
60
4.0
58
78
10
209
33
1
27
37
1.67
31309--31379
3
23.7
3
85
5
99
33
2
0
63
1.09
31318--31391
12
6.4
12
86
9
64
35
2
1
60
1.19
32053--32089
12
3.2
12
84
7
58
59
0
2
37
1.12
34139--34174
18
1.9
19
88
5
56
8
22
13
55
1.65
36111--36164
3
16.3
3
81
14
54
66
1
0
31
1.02
36111--36164
20
2.7
20
85
8
74
66
1
0
31
1.02
36109--36169
23
2.6
23
84
7
70
63
1
1
32
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37123--37379
30
8.5
30
78
9
231
34
22
3
39
1.70
37325--37416
28
3.2
28
82
1
112
36
27
3
32
1.73
37364--37425
29
2.2
29
82
2
72
35
30
1
32
1.68
37404--37448
15
3.0
15
77
9
56
46
24
0
28
1.53
41718--41749
17
1.9
16
93
6
55
65
3
0
31
1.08
41479--41828
180
1.9
184
85
2
483
46
8
10
35
1.67
47432--47468
13
2.8
14
84
8
51
2
16
0
81
0.81
47431--47468
18
2.1
18
85
9
51
2
15
0
81
0.80
63688--63748
17
3.5
17
79
2
68
19
16
13
50
1.77
76835--76873
20
2.0
20
100
0
78
35
7
35
20
1.81
80163--80229
3
22.7
3
92
3
109
64
0
1
34
1.03
81460--81512
22
2.3
23
83
3
72
39
20
22
16
1.92
90750--90800
21
2.5
20
81
15
61
50
0
9
39
1.35
90751--90789
20
2.0
19
85
14
53
53
0
5
41
1.23
90762--90800
21
1.9
21
89
5
62
56
0
7
35
1.28
94914--94985
36
2.0
36
97
0
135
23
16
18
41
1.89
95889--95916
14
2.0
14
100
0
56
35
35
14
14
1.86

Tables:   1

The End!