Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004977.1 Kokia drynarioides strain JFW-HI SEQ_118711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33334

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1503--1826
29
11.0
29
74
11
239
33
34
4
27
1.77
1503--1717
59
3.6
59
85
3
297
35
33
4
26
1.76
1630--1792
89
1.9
87
88
2
245
30
36
6
27
1.81
1503--1826
59
5.5
58
78
7
268
33
34
4
27
1.77
2839--3142
153
2.0
153
94
1
529
43
8
12
35
1.73
11654--11745
48
1.9
47
97
2
175
35
5
30
28
1.80
13925--13978
17
3.2
17
73
5
56
40
0
3
55
1.17
14003--14049
17
2.7
18
80
6
60
42
4
4
48
1.42
16230--16262
7
4.9
7
96
3
59
39
0
60
0
0.97
17350--17410
9
6.9
9
79
1
52
24
34
0
40
1.55
24704--24728
13
1.9
13
100
0
50
48
4
8
40
1.51
24918--24958
6
7.0
6
81
13
50
17
2
0
80
0.82
24918--24959
11
3.7
11
84
15
59
19
2
0
78
0.86
26093--26166
37
2.0
37
94
0
130
36
9
20
33
1.85
26129--26228
30
3.3
30
67
10
87
37
6
25
32
1.80
26242--26510
59
4.5
59
84
8
300
33
2
28
35
1.71
26202--26510
30
10.5
29
81
9
308
34
2
27
34
1.72
26231--26489
89
2.9
88
81
7
310
34
2
28
34
1.70
27506--27537
3
10.7
3
93
0
55
34
3
0
62
1.11
28298--28350
6
9.2
6
83
8
65
54
1
0
43
1.11
28287--28387
17
5.8
17
80
9
82
59
1
0
37
1.15
28294--28350
23
2.5
23
88
2
80
57
1
0
40
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28267--28390
58
2.2
58
85
4
162
54
2
0
41
1.19
28276--28382
35
2.8
38
83
13
123
57
2
0
39
1.20
28287--28390
11
9.5
11
66
25
53
57
1
0
39
1.16
30356--30394
21
1.9
20
89
5
60
0
17
0
82
0.68
30400--30428
14
2.1
14
93
6
51
0
6
10
82
0.83

Tables:   1

The End!