Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005005.1 Kokia drynarioides strain JFW-HI SEQ_118764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  125482

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1623--1683
19
3.3
18
68
13
52
52
3
1
42
1.27
1608--1682
37
2.0
37
94
0
132
49
2
2
45
1.30
16604--16628
3
8.3
3
100
0
50
32
0
32
36
1.58
20487--20546
33
1.9
33
86
10
90
35
15
16
33
1.90
26518--26554
18
2.1
18
90
10
58
56
5
16
21
1.59
30835--30878
22
2.0
23
86
13
65
27
0
4
68
1.09
30793--30882
9
10.7
9
71
15
50
35
0
3
61
1.13
30922--30965
20
2.2
20
88
12
63
27
2
4
65
1.23
34985--35055
21
3.3
20
67
24
54
47
2
5
43
1.41
34983--35055
24
3.2
24
69
16
73
49
2
5
42
1.40
40760--40874
9
11.9
10
68
23
59
32
1
2
63
1.18
40764--40873
18
5.7
19
74
17
86
31
1
2
63
1.19
42429--42464
19
1.9
19
88
5
56
50
0
0
50
1.00
51726--51786
26
2.3
26
100
0
122
32
6
3
57
1.41
53733--53793
20
3.1
19
77
11
61
31
1
3
63
1.20
53748--53820
10
7.5
10
75
17
57
35
1
1
61
1.13
53761--53820
19
3.2
19
81
9
70
35
0
1
63
1.05
53750--53806
31
1.9
28
86
10
78
33
1
1
63
1.15
54545--54582
7
5.6
7
93
6
69
86
0
0
13
0.56
63376--63471
49
2.0
49
87
4
140
42
9
18
29
1.82
65745--65792
22
2.2
22
85
7
62
39
0
2
58
1.10
73575--73846
10
28.4
9
66
20
83
59
2
2
34
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73624--73709
29
3.0
30
76
22
87
61
4
1
32
1.24
73701--73805
11
10.1
10
68
15
54
56
1
1
40
1.21
74408--74467
31
1.9
32
83
10
79
36
1
8
53
1.41
74451--74494
21
2.1
21
83
8
54
34
0
4
61
1.16
74452--74564
39
3.0
39
76
14
112
38
0
3
57
1.22
75082--75215
31
4.5
31
72
14
102
50
10
11
27
1.72
75032--75215
90
2.1
89
84
5
237
50
12
13
24
1.76
77153--77193
21
2.0
20
85
4
55
29
4
14
51
1.63
83486--83540
19
2.8
20
76
15
60
60
0
0
40
0.97
91319--91445
63
2.0
63
100
0
254
24
20
22
33
1.97
108001--108030
9
3.3
9
95
0
51
33
26
6
33
1.83
112066--112119
21
2.5
21
85
8
65
29
1
5
62
1.28
112990--113071
7
11.7
7
70
10
51
26
2
26
43
1.67
112985--113070
14
6.1
14
71
12
61
26
2
27
43
1.67
114306--114577
135
2.0
135
85
2
368
26
17
25
30
1.97
114845--114903
18
3.3
17
79
9
64
28
8
47
15
1.74
115325--115438
48
2.4
48
86
2
158
19
17
25
37
1.93
115721--115755
15
2.2
16
90
5
54
51
34
5
8
1.56
121615--121666
20
2.6
20
96
0
95
19
23
21
36
1.95
122720--122753
3
12.0
3
87
12
54
32
0
0
67
0.91
124735--125258
168
3.1
168
85
2
708
33
24
18
23
1.97

Tables:   1

The End!