Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005007.1 Kokia drynarioides strain JFW-HI SEQ_118766, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80319

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2391--2417
14
1.9
14
100
0
54
22
7
0
70
1.12
7913--7982
23
3.0
23
76
2
77
42
15
11
30
1.82
25606--25636
16
1.9
16
93
0
53
35
12
3
48
1.58
26905--27043
69
2.0
69
100
0
278
43
10
18
27
1.82
29501--29542
6
7.2
6
83
5
59
38
0
47
14
1.44
29509--29541
17
1.9
17
93
0
57
42
0
48
9
1.35
29668--29700
6
5.5
6
100
0
66
63
0
36
0
0.95
34158--34234
40
1.9
40
94
0
136
31
20
20
27
1.98
35157--35194
13
3.0
13
84
3
51
5
26
7
60
1.46
37563--37631
25
2.6
27
88
9
115
24
23
20
31
1.98
42141--42209
31
2.2
31
84
0
84
53
2
4
39
1.36
50861--50902
16
2.5
17
92
3
68
69
0
0
30
0.89
50861--50919
17
3.4
17
82
15
59
66
1
1
30
1.12
51023--51065
21
2.0
21
81
0
50
48
0
0
51
1.00
51031--51106
29
2.6
29
79
10
91
40
1
0
57
1.07
55016--55040
10
2.5
10
100
0
50
92
0
0
8
0.40
66429--66568
23
6.1
23
90
0
208
10
27
20
42
1.85
66585--66665
23
3.6
23
96
1
146
12
20
29
37
1.90
67980--68015
17
2.1
17
94
0
63
33
13
22
30
1.93
68720--68787
6
11.3
6
71
12
50
20
32
2
44
1.67
79332--79392
26
2.3
25
83
13
77
39
0
0
60
0.97

Tables:   1

The End!