Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005038.1 Kokia drynarioides strain JFW-HI SEQ_118807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58626

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2615--2653
19
2.1
19
85
0
51
38
10
2
48
1.51
3454--3516
13
4.8
13
76
0
63
41
20
0
38
1.53
3787--3839
9
5.6
9
76
12
52
43
5
0
50
1.25
3761--3938
30
5.8
29
75
15
130
42
11
3
42
1.59
5272--5345
31
2.4
31
77
4
78
40
5
6
47
1.53
16692--16742
11
4.7
11
78
11
52
78
7
0
13
0.96
16690--16735
16
2.9
16
81
9
58
80
6
0
13
0.89
16692--16741
13
3.5
13
83
10
55
80
6
0
14
0.90
17929--18139
29
7.2
29
72
11
144
38
21
4
35
1.75
17929--18139
59
3.6
59
75
8
157
38
21
4
35
1.75
17929--18139
88
2.4
88
79
4
210
38
21
4
35
1.75
18000--18143
59
2.4
59
80
6
159
38
22
4
34
1.75
29733--29865
50
2.7
50
83
0
140
34
18
25
21
1.96
29942--30134
39
4.9
40
80
5
223
29
22
18
29
1.97
29923--30134
79
2.7
79
88
2
300
29
23
16
30
1.97
30781--30833
24
2.3
23
81
12
63
50
37
3
7
1.49
31915--32151
30
8.0
30
76
5
203
38
21
4
35
1.74
31915--32151
59
4.0
60
78
7
252
38
21
4
35
1.74
37816--37866
18
2.8
19
77
16
63
33
9
17
39
1.83
46100--46244
72
2.0
72
98
0
281
31
13
20
35
1.91
51124--51166
18
2.4
18
88
7
61
46
0
0
53
1.00
54338--54466
48
2.7
48
92
0
213
29
16
20
33
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55582--55616
15
2.3
15
90
0
52
22
11
28
37
1.89
55754--55795
16
2.6
17
81
7
52
28
0
33
38
1.58

Tables:   1

The End!