Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005063.1 Kokia drynarioides strain JFW-HI SEQ_118859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44189

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
916--963
24
2.0
25
87
4
71
52
0
2
45
1.12
931--980
20
2.5
20
79
20
61
54
0
2
44
1.11
937--985
22
2.3
21
82
6
55
51
0
2
46
1.12
1543--1676
55
2.4
55
86
2
180
26
11
16
45
1.82
2948--3055
56
2.0
54
88
3
162
50
13
10
25
1.74
2949--3068
56
2.2
54
86
3
159
50
14
9
26
1.72
4649--4782
55
2.4
55
86
2
180
45
16
11
26
1.82
7532--7596
30
2.2
29
83
8
78
69
4
4
21
1.25
14126--14179
24
2.2
24
87
6
74
29
18
22
29
1.97
15807--15848
21
2.0
21
85
0
57
45
4
16
33
1.69
17658--17711
21
2.6
21
88
5
74
31
11
25
31
1.91
28017--28057
17
2.4
18
80
19
52
14
17
14
53
1.73
28638--28674
18
2.0
18
89
5
56
86
0
8
5
0.70
28650--28681
10
3.1
10
91
8
55
90
0
9
0
0.45
28650--28681
11
3.0
11
95
4
57
90
0
9
0
0.45
30494--30572
6
13.3
6
70
12
56
37
2
2
56
1.26
30527--30597
34
2.1
34
82
7
83
47
1
4
46
1.30
31256--31289
17
2.0
17
88
11
52
29
11
0
58
1.33
31321--31415
3
30.7
3
74
14
77
56
2
3
37
1.27
31309--31346
15
2.5
15
91
0
58
57
2
5
34
1.35
31307--31415
12
8.8
12
72
17
73
55
2
3
37
1.32
32508--32867
30
12.1
29
68
15
157
33
23
1
41
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32507--32896
59
6.6
60
78
10
360
33
24
1
40
1.66
32828--32925
31
3.3
30
70
16
78
30
24
4
40
1.74
32533--32969
59
7.4
60
79
8
224
32
24
3
40
1.71

Tables:   1

The End!