Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005082.1 Kokia drynarioides strain JFW-HI SEQ_118892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61338

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8619--8678
30
2.0
30
96
0
111
35
10
25
30
1.88
12966--13038
31
2.4
31
83
4
94
28
13
10
46
1.77
13245--13375
59
2.2
62
83
4
169
47
12
17
22
1.81
18366--18421
20
2.8
20
80
0
67
30
26
10
32
1.90
24162--24200
21
1.9
20
84
5
51
51
5
15
28
1.64
26093--26238
43
3.4
43
81
7
163
17
15
22
44
1.86
26193--26296
43
2.4
43
80
3
120
19
17
23
40
1.91
29114--29205
31
3.0
30
72
12
78
27
9
17
45
1.79
30474--30501
1
28.0
1
100
0
56
0
0
0
100
0.00
32127--32206
25
3.2
24
70
16
65
63
2
1
32
1.15
32182--32217
18
1.9
19
88
5
56
61
2
0
36
1.11
32175--32219
19
2.4
19
81
7
56
62
2
0
35
1.08
32418--32455
18
2.0
19
85
10
51
65
2
0
31
1.06
34152--34331
86
2.1
86
92
0
297
27
15
16
41
1.88
41192--41335
68
2.1
68
96
1
261
36
18
23
20
1.95
44400--44440
21
2.0
21
85
0
55
36
2
4
56
1.34
46496--46530
18
1.9
18
94
0
61
11
2
0
85
0.69
53469--53500
16
1.9
17
93
6
57
56
0
0
43
0.99
53462--53525
24
2.8
24
75
11
71
60
0
0
39
0.97
54214--54368
77
2.0
77
100
0
310
21
21
19
36
1.95
56320--56365
24
1.9
23
86
8
65
54
6
4
34
1.46
59190--59224
2
18.0
2
94
5
63
51
0
0
48
1.00

Tables:   1

The End!