Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005098.1 Kokia drynarioides strain JFW-HI SEQ_118919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92394

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4222--4263
16
2.6
17
70
14
52
45
0
0
54
0.99
4246--4286
11
3.8
11
83
3
57
46
0
0
53
1.00
5275--5311
17
2.2
17
90
9
58
54
0
0
45
1.00
7419--7475
29
1.9
29
82
10
71
49
8
5
36
1.57
7428--7486
29
2.0
30
83
3
75
49
11
5
33
1.62
8387--8422
19
1.9
19
88
5
56
41
8
13
36
1.75
10833--10863
3
10.3
3
92
0
53
35
35
29
0
1.58
10833--10899
12
5.6
12
83
13
75
38
37
23
0
1.55
20344--20400
29
2.0
29
82
3
71
42
8
14
35
1.76
26919--26988
19
3.7
19
81
7
81
37
0
5
57
1.23
32226--32263
20
1.9
20
94
0
67
36
13
23
26
1.91
32657--32700
21
2.1
21
83
4
54
34
2
4
59
1.30
33466--33491
12
2.2
12
100
0
52
73
11
0
15
1.11
33471--33543
23
3.2
23
77
11
69
72
15
2
9
1.21
33506--33585
12
6.6
11
74
13
52
72
16
5
6
1.23
33538--33583
14
3.3
13
82
14
56
73
13
8
4
1.21
47467--47505
17
2.3
18
86
8
55
58
10
0
30
1.31
54755--54783
15
2.0
15
93
6
51
65
0
0
34
0.93
59319--59376
29
2.0
30
93
3
100
41
3
10
44
1.55
60761--61104
123
2.9
121
85
2
453
17
20
30
31
1.95
75650--75674
12
2.1
12
100
0
50
24
8
24
44
1.80
78479--78521
22
2.0
22
81
9
52
32
4
13
48
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83230--83260
12
2.6
12
94
0
53
19
0
0
80
0.71
86123--86278
76
2.1
76
90
2
242
34
10
9
45
1.71
91561--91633
34
2.1
34
82
9
96
49
5
6
38
1.53
91632--91670
18
2.2
17
90
4
60
61
0
0
38
0.96

Tables:   1

The End!