Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005127.1 Kokia drynarioides strain JFW-HI SEQ_118962, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46013

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3050--3092
16
2.8
16
82
3
52
46
2
0
51
1.13
4812--4846
17
2.0
18
88
5
54
45
0
0
54
0.99
4710--4998
90
3.1
90
73
14
230
30
6
8
54
1.55
4987--5041
17
3.4
17
76
18
55
38
0
0
61
0.96
5005--5042
17
2.2
18
90
4
60
36
0
0
63
0.95
4937--5167
105
2.2
106
86
3
326
29
6
9
53
1.59
4710--5061
192
1.8
190
89
4
548
31
5
8
54
1.53
5109--5144
18
2.0
18
88
0
54
41
0
5
52
1.24
4747--5180
105
4.4
102
69
15
282
31
7
9
52
1.61
5010--5198
106
1.8
103
80
7
229
29
7
10
52
1.62
5010--5210
105
1.9
104
80
6
235
28
6
10
54
1.60
10805--10844
19
2.1
19
86
9
55
67
5
7
20
1.34
16911--16950
21
2.0
21
90
5
64
42
10
17
30
1.82
19340--19440
50
2.0
50
96
0
184
32
6
14
45
1.72
25167--25215
21
2.3
21
82
0
62
32
16
26
24
1.96
25523--25622
30
3.3
29
78
6
110
22
25
21
32
1.98
27226--27278
27
2.0
27
88
0
79
26
20
0
52
1.46
27632--27698
23
2.9
23
84
6
73
68
0
8
22
1.17
36076--36177
36
2.8
36
86
0
150
22
25
17
34
1.96
43557--43606
18
2.8
18
85
11
75
42
12
12
34
1.79
44029--44355
72
4.6
72
93
0
559
22
5
16
55
1.62

Tables:   1

The End!