Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005129.1 Kokia drynarioides strain JFW-HI SEQ_118964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41924

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
670--779
25
4.3
25
71
18
75
39
4
0
55
1.27
724--779
23
2.3
23
84
6
67
44
1
0
53
1.11
724--798
23
3.1
24
76
16
66
41
1
1
56
1.16
1011--1052
21
2.0
21
85
0
57
38
23
7
30
1.82
1019--1058
21
1.9
21
84
0
53
40
25
7
27
1.82
1080--1111
7
4.7
7
96
3
57
15
15
31
37
1.89
4252--4310
27
2.2
27
81
6
66
28
11
27
32
1.92
4321--4464
29
4.9
31
72
16
110
33
2
26
37
1.71
4392--4486
29
3.2
29
74
14
88
29
5
27
37
1.79
4333--4495
58
2.8
58
80
9
179
31
3
25
38
1.74
6169--6208
18
2.2
19
86
8
57
27
2
30
40
1.70
6300--6389
17
5.1
17
78
9
74
48
4
3
43
1.39
6315--6403
6
15.3
6
70
11
69
52
2
3
41
1.30
12529--12573
5
9.0
5
95
0
81
2
0
57
40
1.11
12743--12790
27
1.9
23
84
16
60
37
2
2
58
1.22
12807--12859
28
1.9
27
85
11
72
52
9
1
35
1.45
23549--23574
13
2.0
13
100
0
52
46
0
0
53
1.00
24920--24960
21
2.0
21
85
9
57
29
7
2
60
1.36
27105--27141
20
1.9
20
88
5
58
18
8
2
70
1.25
34608--34637
5
6.0
5
100
0
60
20
60
0
20
1.37

Tables:   1

The End!