Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005152.1 Kokia drynarioides strain JFW-HI SEQ_118997, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57891

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33--75
14
3.0
14
75
3
50
18
0
11
69
1.17
127--194
27
2.5
27
82
0
82
17
26
30
25
1.97
4086--4112
13
2.1
13
100
0
54
22
0
0
77
0.76
4081--4270
67
2.9
63
82
11
242
44
0
4
51
1.25
18874--18919
20
2.2
21
88
3
67
28
23
6
41
1.79
19949--19983
2
17.5
2
100
0
70
48
0
0
51
1.00
21273--21318
21
2.2
20
82
17
58
47
4
4
43
1.42
21544--21596
20
2.7
19
83
11
63
41
1
3
52
1.30
21551--21596
20
2.3
20
88
3
67
43
2
2
52
1.25
27282--27333
26
2.0
26
100
0
104
46
7
15
30
1.74
34041--34109
22
3.2
20
74
11
59
42
8
17
31
1.80
35968--36190
69
3.1
69
62
18
164
38
10
18
32
1.86
35924--36225
148
2.0
148
98
0
586
39
10
18
32
1.84
36202--36255
23
2.3
23
96
0
99
37
18
18
25
1.94
36346--36394
19
2.5
19
87
9
64
57
6
0
36
1.24
36565--36593
14
2.0
15
93
6
51
34
0
13
51
1.42
36646--36684
14
2.6
15
84
12
53
35
15
5
43
1.69
43030--43085
20
2.8
20
80
0
67
32
1
3
62
1.23
48749--48776
4
7.0
4
100
0
56
75
0
25
0
0.81

Tables:   1

The End!