Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005179.1 Kokia drynarioides strain JFW-HI SEQ_119036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51753

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2826--2870
19
2.3
19
88
3
63
31
8
22
37
1.85
10076--10110
3
11.7
3
93
0
61
0
31
0
68
0.90
10617--10706
44
2.0
44
84
0
117
48
4
10
36
1.57
15114--15169
21
2.6
21
77
5
58
33
3
1
60
1.24
15675--15763
39
2.4
37
80
15
119
42
1
15
40
1.54
15690--15770
39
2.0
40
97
2
155
41
0
18
39
1.51
16152--16190
17
2.3
17
86
0
51
48
25
10
15
1.76
23561--23628
24
2.8
24
97
0
127
11
29
22
36
1.89
29884--29961
6
13.3
6
71
15
56
39
1
2
56
1.21
29884--29970
23
4.0
23
72
14
85
40
1
4
54
1.29
29884--29934
18
2.9
17
88
5
75
39
0
1
58
1.09
31680--31925
28
8.5
29
71
14
118
36
25
2
36
1.69
31670--31924
88
2.9
86
79
9
248
36
25
1
36
1.67
31665--32075
29
14.2
28
72
12
215
34
26
2
36
1.71
31847--32032
28
6.5
28
76
10
108
33
25
3
37
1.74
31665--32041
30
13.0
28
71
11
172
34
25
2
37
1.71
32331--32384
27
2.0
27
100
0
108
33
14
3
48
1.62
33514--33540
2
13.5
2
100
0
54
51
0
0
48
1.00
34808--34842
18
2.0
17
94
5
61
57
0
0
42
0.99
35433--35461
6
4.8
6
100
0
58
51
0
34
13
1.42
35819--35887
36
1.9
36
85
5
95
46
10
7
36
1.65
44287--44357
28
2.5
28
86
0
97
36
15
23
23
1.94

Tables:   1

The End!