Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005232.1 Kokia drynarioides strain JFW-HI SEQ_119118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78316

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1548--1594
21
2.3
20
85
10
60
34
0
4
61
1.15
6030--6054
13
1.9
13
100
0
50
92
0
8
0
0.40
8157--8189
16
2.2
15
89
10
50
42
0
0
57
0.98
22583--22640
28
2.0
29
83
9
75
43
1
8
46
1.44
23218--23246
11
2.6
11
100
0
58
89
0
0
10
0.48
24299--24379
31
2.7
30
83
11
87
35
2
8
53
1.45
24524--24612
29
2.9
31
80
14
98
42
13
7
35
1.73
25440--25482
21
2.0
22
86
4
61
44
2
0
53
1.13
26234--26273
14
2.9
14
84
0
53
70
2
0
27
1.01
29924--29948
13
1.9
13
100
0
50
32
16
16
36
1.90
31937--32018
43
1.9
43
82
0
101
39
20
13
26
1.90
33236--33321
32
2.7
32
87
1
120
44
19
9
26
1.81
44168--44192
6
4.2
6
100
0
50
52
0
16
32
1.44
49328--49501
53
3.3
53
87
0
249
40
11
5
42
1.63
53712--53766
15
3.9
15
79
13
71
25
32
14
27
1.95
55271--55305
17
2.0
18
88
5
54
77
2
0
20
0.90
55477--55549
36
2.0
36
97
0
137
31
12
2
53
1.52
61120--61157
15
2.5
16
79
12
53
44
15
31
7
1.75
61453--61539
29
3.0
29
75
1
84
21
32
18
27
1.97
68990--69058
30
2.3
30
85
12
88
50
20
11
17
1.76
74542--74582
2
20.5
2
85
9
57
53
0
2
43
1.13
75923--75978
26
2.1
27
87
9
80
48
5
0
46
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75931--75984
28
2.0
26
82
13
65
53
5
0
40
1.24

Tables:   1

The End!