Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000529.1 Kokia drynarioides strain JFW-HI SEQ_111419, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33315

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6378--6416
21
2.0
20
85
10
53
71
2
0
25
0.98
6386--6419
13
2.5
13
85
4
50
70
2
0
26
1.01
9886--10060
87
2.0
87
100
0
350
39
16
10
34
1.82
11057--11115
27
2.2
26
82
11
75
44
0
3
52
1.17
11549--11576
2
14.0
2
100
0
56
50
0
0
50
1.00
12754--12993
43
5.6
43
81
0
201
30
28
17
24
1.97
19047--19292
34
7.4
34
74
12
233
42
0
8
48
1.37
19050--19123
30
2.7
27
80
13
96
39
0
10
50
1.38
19153--19193
20
2.0
20
85
0
55
51
0
0
48
1.00
19203--19265
4
16.5
4
74
12
53
47
0
1
50
1.10
19143--19292
72
2.1
70
87
2
210
46
0
6
48
1.27
19031--19288
126
2.0
125
80
8
281
42
0
8
48
1.36
19248--19314
26
2.6
27
85
4
84
40
2
10
46
1.53
24455--24771
41
7.8
41
81
3
313
19
27
20
32
1.97
24488--24771
82
3.5
81
83
3
356
19
27
20
32
1.97
27665--27707
17
2.5
18
79
20
56
53
11
13
20
1.71
27700--27736
18
2.1
18
89
0
56
59
10
10
18
1.59
28204--28250
15
2.9
16
81
12
51
6
34
6
53
1.52

Tables:   1

The End!