Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005323.1 Kokia drynarioides strain JFW-HI SEQ_119261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72430

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1349--1434
29
2.8
30
70
14
77
52
4
11
31
1.58
1423--1483
25
2.4
24
83
8
68
65
9
1
22
1.31
5939--6737
199
4.0
198
89
3
1131
37
15
11
36
1.83
5939--6737
397
2.0
397
87
3
1160
37
15
11
36
1.83
7515--7563
24
2.0
24
100
0
98
44
12
0
42
1.41
9352--9376
11
2.3
11
100
0
50
16
0
0
84
0.63
13067--13120
22
2.5
22
96
0
99
29
31
20
18
1.96
14627--14677
2
25.5
2
83
0
66
0
3
45
50
1.20
20565--20608
21
2.1
21
87
8
63
34
29
9
27
1.87
20985--21045
30
2.0
30
93
0
104
49
16
11
22
1.78
27669--27719
21
2.5
20
72
12
50
35
23
13
27
1.93
31690--31729
20
2.0
20
85
5
53
25
20
45
10
1.81
35081--35723
69
9.3
69
73
8
378
30
17
22
30
1.96
34953--35727
207
3.7
208
77
3
722
30
17
22
30
1.96
36888--36928
22
1.9
21
85
5
55
56
14
17
12
1.68
37859--37919
28
2.2
28
81
0
68
22
29
18
29
1.97
45403--45635
120
1.9
120
88
1
351
29
14
25
30
1.95
57070--57158
29
3.1
29
72
18
94
50
12
4
32
1.60
57686--57765
22
3.4
22
69
21
63
48
1
0
50
1.08
57688--57783
49
1.9
50
89
2
149
52
2
0
45
1.12
57703--57800
49
2.0
48
84
11
128
52
3
0
44
1.16
69885--69929
6
7.5
6
89
0
63
22
31
0
46
1.52

Tables:   1

The End!