Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005329.1 Kokia drynarioides strain JFW-HI SEQ_119280, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51223

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
100
0
70
48
0
0
51
1.00
5952--5990
21
2.0
21
90
10
64
43
5
5
46
1.48
18452--18486
3
11.7
3
93
0
61
28
0
0
71
0.86
19501--19527
14
1.9
14
100
0
54
40
0
7
51
1.30
19513--19565
4
13.2
4
95
0
88
28
0
20
50
1.48
20803--20838
2
18.0
2
100
0
72
50
0
50
0
1.00
28216--28302
30
2.9
28
75
12
84
41
4
9
44
1.57
28260--28333
31
2.4
31
81
2
87
45
2
9
41
1.50
28260--28342
30
2.7
30
79
3
87
45
4
8
40
1.56
30297--30411
30
3.8
29
80
8
124
41
19
3
35
1.68
30295--30439
30
4.8
30
73
17
115
42
17
3
35
1.67
30297--30439
60
2.4
60
79
11
150
43
17
3
35
1.66
31313--31356
22
2.0
22
86
0
61
52
6
13
27
1.66
32861--32885
6
4.2
6
100
0
50
32
48
0
20
1.50
33780--33894
49
2.3
49
98
0
221
38
9
19
33
1.84
35257--35281
3
8.3
3
100
0
50
36
0
0
64
0.94
35466--35494
2
14.5
2
100
0
58
48
0
0
51
1.00
42587--42613
2
13.5
2
100
0
54
51
0
0
48
1.00
43190--43229
19
2.0
20
85
4
55
42
0
10
47
1.37

Tables:   1

The End!