Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000535.1 Kokia drynarioides strain JFW-HI SEQ_111430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57197

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
471--512
21
2.0
22
85
4
59
71
4
9
14
1.28
1492--1525
2
17.0
2
100
0
68
50
0
0
50
1.00
14765--14806
20
2.0
22
90
9
70
52
0
0
47
1.00
14755--14812
20
3.1
19
77
20
59
44
1
0
53
1.10
17741--17767
8
3.4
8
100
0
54
88
0
11
0
0.50
20749--20787
19
2.1
19
95
0
69
25
35
7
30
1.84
21278--21349
25
2.8
25
89
8
110
38
18
29
13
1.89
21303--21403
22
4.4
22
81
10
98
40
21
24
12
1.89
22008--22034
10
2.7
10
100
0
54
18
11
0
70
1.16
23618--23676
15
4.0
15
71
18
52
55
0
6
37
1.26
26145--26183
18
2.2
18
86
9
53
20
23
0
56
1.42
27189--27243
17
3.1
19
75
17
55
41
0
3
54
1.18
27654--27687
2
17.0
2
100
0
68
50
0
0
50
1.00
28505--28529
3
8.3
3
100
0
50
64
0
0
36
0.94
28757--28795
18
2.2
18
100
0
78
56
25
0
17
1.41
36222--36289
29
2.3
28
78
14
75
47
1
10
41
1.47
37372--37673
57
5.2
57
75
8
252
28
17
17
36
1.92
37372--37609
117
2.0
117
87
6
340
28
17
17
36
1.92
37428--37643
117
1.9
117
86
1
308
28
18
15
37
1.91
37682--37843
63
2.6
63
83
4
186
28
19
16
35
1.93
40898--40979
42
2.0
42
86
9
116
43
17
10
28
1.82
41413--41529
58
2.0
58
90
3
182
34
0
20
44
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46333--46357
12
2.1
12
100
0
50
20
0
32
48
1.50
46620--46649
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!