Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005363.1 Kokia drynarioides strain JFW-HI SEQ_119345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98599

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8233--8257
7
3.6
7
100
0
50
24
32
16
28
1.96
11989--12032
22
2.0
23
86
4
63
40
0
15
43
1.47
13564--13906
79
4.4
79
81
5
417
25
18
23
31
1.98
18811--18840
12
2.5
12
94
0
51
0
10
0
90
0.47
18811--18840
16
1.9
15
93
6
51
0
10
0
90
0.47
20974--20999
3
8.7
3
100
0
52
0
0
30
69
0.89
38547--38606
19
3.2
19
73
21
63
33
1
6
58
1.34
38555--38606
18
2.8
19
71
26
56
32
1
7
57
1.38
39424--39459
18
2.0
18
88
0
54
11
33
22
33
1.89
57315--57350
14
2.6
14
90
0
54
44
2
19
33
1.65
68581--68629
21
2.3
21
82
3
62
63
6
0
30
1.19
68616--68646
15
2.0
16
93
6
55
70
0
0
29
0.87
68727--68763
19
1.9
19
89
10
58
54
2
24
18
1.57
69716--69771
27
2.0
28
86
6
78
19
1
14
64
1.38
80872--80896
4
6.2
4
100
0
50
0
0
72
28
0.86
87610--87665
21
2.6
21
83
13
62
28
0
3
67
1.07
94632--94686
8
6.6
8
87
8
65
56
0
0
43
0.99
94634--94682
2
24.5
2
95
0
89
53
0
0
46
1.00
96446--96487
17
2.3
19
84
12
52
42
0
0
57
0.99
96432--96491
26
2.3
26
80
13
70
45
0
0
55
0.99
96431--96487
20
3.0
20
73
19
59
47
0
0
52
1.00

Tables:   1

The End!