Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000538.1 Kokia drynarioides strain JFW-HI SEQ_111437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82910

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
403--452
21
2.4
21
100
0
100
30
34
14
22
1.93
4223--4247
13
1.9
13
100
0
50
84
0
16
0
0.63
15034--15105
21
3.4
21
68
11
58
38
16
18
26
1.91
15814--15910
25
3.8
25
74
12
72
37
25
15
21
1.93
27360--27482
25
4.9
25
78
3
113
33
23
17
25
1.97
35650--35703
26
2.1
26
82
0
63
27
14
24
33
1.94
44860--44955
47
2.0
47
100
0
192
27
27
10
35
1.89
56619--56678
26
2.3
26
79
0
75
38
20
10
31
1.85
60482--60518
18
2.0
19
89
5
58
29
5
10
54
1.57
64649--64745
48
2.0
48
97
0
185
42
11
18
27
1.85
65391--65527
68
2.0
68
98
0
265
31
26
9
32
1.88
67025--67059
18
1.9
18
94
0
61
28
5
8
57
1.52
68590--68643
23
2.3
23
84
9
65
61
7
3
27
1.40
68826--68864
18
2.2
18
86
9
53
74
5
2
17
1.12
68858--68903
22
2.1
21
84
11
58
69
6
4
19
1.28
68882--68931
16
2.9
18
81
16
54
70
6
8
16
1.32
68929--68969
4
10.8
4
79
10
50
73
2
0
24
0.96
68929--68969
15
2.7
15
88
7
57
73
2
0
24
0.96
68929--68969
19
2.2
19
90
0
64
73
2
0
24
0.96
68846--68950
11
9.7
10
66
16
50
70
5
4
19
1.26
69918--70493
45
12.8
45
81
4
565
26
17
24
31
1.97
70651--70919
98
2.7
97
78
5
222
20
20
15
43
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70600--70891
49
5.9
49
71
7
171
20
20
16
42
1.90
70854--71009
48
3.2
48
78
3
161
20
21
14
43
1.87
80942--80970
14
2.0
15
93
6
51
58
13
13
13
1.63

Tables:   1

The End!