Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005393.1 Kokia drynarioides strain JFW-HI SEQ_119397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53504

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5000--5102
46
2.2
46
86
6
138
51
10
4
33
1.58
6956--6997
21
2.0
21
90
0
66
42
19
19
19
1.89
8156--8430
138
2.0
138
94
0
487
27
16
26
29
1.97
14257--14293
18
2.0
19
89
5
58
62
13
2
21
1.44
19963--20038
6
13.2
6
74
13
70
42
0
5
52
1.24
19963--20045
40
2.1
39
86
6
114
42
0
4
53
1.22
19966--20045
23
3.8
21
75
20
69
40
0
5
55
1.22
19966--20023
17
3.4
17
90
0
98
39
0
3
56
1.16
20006--20048
22
1.9
23
95
4
79
39
0
6
53
1.28
21707--22070
30
12.1
30
77
11
266
36
26
2
33
1.70
21707--22070
90
4.0
86
77
8
316
36
26
2
33
1.70
27108--27133
6
4.3
6
100
0
52
15
53
15
15
1.73
28038--28136
10
9.5
10
69
20
53
57
1
3
38
1.21
28025--28072
21
2.3
22
79
17
57
58
2
4
35
1.29
28029--28112
40
2.1
40
84
6
107
57
1
3
38
1.24
28025--28159
41
3.3
41
80
13
122
54
0
3
40
1.23
28351--28437
3
29.0
3
100
0
174
66
0
33
0
0.92
29063--29226
82
2.0
82
98
0
319
33
10
7
48
1.66
36080--36133
25
2.1
26
89
3
83
64
1
0
33
1.04
53449--53504
2
28.0
2
100
0
112
50
0
0
50
1.00

Tables:   1

The End!